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Investigation of suspected false positive norovirus results on a syndromic gastrointestinal multiplex molecular panel.
- Source :
-
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology [J Clin Virol] 2024 Dec; Vol. 175, pp. 105732. Date of Electronic Publication: 2024 Sep 30. - Publication Year :
- 2024
-
Abstract
- Background: Suspected false positive norovirus results occurred after introduction of the BioFire® FilmArray® Gastrointestinal panel (BF-GIP) into 6 laboratory sites, in British Columbia, Canada.<br />Objectives: The primary objective was to investigate suspected false positive results by performing additional molecular assays and whole genome sequencing (WGS). The second objective was to determine if melting curve review could predict false positive results.<br />Study Design: From February 2023 to May 2024, the proportion of potential false positive norovirus results from the BF-GIP was calculated based on confirmatory testing using alternate molecular method. A subset of 65 norovirus BF-GIP positive specimens, including 35 negatives and 30 positives on additional molecular assays, underwent WGS. Melting curves appearances from 150 specimens were reviewed.<br />Results: Overall, 215/784 (27.4 %) BF-GIP norovirus results were suspected to be false positives. When using WGS, 64/65 results were in agreement with confirmatory testing. Notably, 35 specimens negative on confirmatory testing and suspected to be BF-GIP norovirus false positive results were undetectable by WGS. Melting curves did not accurately predict false positives, since 20/72 (27.8 %) had typical appearances upon review.<br />Conclusions: BF-GIP produces false positive results for norovirus, which cannot be predicted by melting curve review.<br />Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.<br /> (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Subjects :
- Humans
False Positive Reactions
Whole Genome Sequencing
Molecular Diagnostic Techniques methods
British Columbia
Feces virology
Norovirus genetics
Norovirus isolation & purification
Caliciviridae Infections diagnosis
Caliciviridae Infections virology
Gastroenteritis virology
Gastroenteritis diagnosis
Subjects
Details
- Language :
- English
- ISSN :
- 1873-5967
- Volume :
- 175
- Database :
- MEDLINE
- Journal :
- Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology
- Publication Type :
- Academic Journal
- Accession number :
- 39369683
- Full Text :
- https://doi.org/10.1016/j.jcv.2024.105732