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Investigation of suspected false positive norovirus results on a syndromic gastrointestinal multiplex molecular panel.

Authors :
Caza M
Kuchinski K
Locher K
Gubbay J
Harms M
Goldfarb DM
Floyd R
Kenmuir E
Kalhor M
Charles M
Prystajecky N
Wilmer A
Source :
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology [J Clin Virol] 2024 Dec; Vol. 175, pp. 105732. Date of Electronic Publication: 2024 Sep 30.
Publication Year :
2024

Abstract

Background: Suspected false positive norovirus results occurred after introduction of the BioFire® FilmArray® Gastrointestinal panel (BF-GIP) into 6 laboratory sites, in British Columbia, Canada.<br />Objectives: The primary objective was to investigate suspected false positive results by performing additional molecular assays and whole genome sequencing (WGS). The second objective was to determine if melting curve review could predict false positive results.<br />Study Design: From February 2023 to May 2024, the proportion of potential false positive norovirus results from the BF-GIP was calculated based on confirmatory testing using alternate molecular method. A subset of 65 norovirus BF-GIP positive specimens, including 35 negatives and 30 positives on additional molecular assays, underwent WGS. Melting curves appearances from 150 specimens were reviewed.<br />Results: Overall, 215/784 (27.4 %) BF-GIP norovirus results were suspected to be false positives. When using WGS, 64/65 results were in agreement with confirmatory testing. Notably, 35 specimens negative on confirmatory testing and suspected to be BF-GIP norovirus false positive results were undetectable by WGS. Melting curves did not accurately predict false positives, since 20/72 (27.8 %) had typical appearances upon review.<br />Conclusions: BF-GIP produces false positive results for norovirus, which cannot be predicted by melting curve review.<br />Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.<br /> (Copyright © 2024 Elsevier B.V. All rights reserved.)

Details

Language :
English
ISSN :
1873-5967
Volume :
175
Database :
MEDLINE
Journal :
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology
Publication Type :
Academic Journal
Accession number :
39369683
Full Text :
https://doi.org/10.1016/j.jcv.2024.105732