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SRF promotes long-range chromatin loop formation and stem cell pluripotency.
- Source :
-
Cell reports [Cell Rep] 2024 Oct 22; Vol. 43 (10), pp. 114846. Date of Electronic Publication: 2024 Oct 10. - Publication Year :
- 2024
-
Abstract
- Serum response factor (SRF) is a transcription factor essential for cell proliferation, differentiation, and migration and is required for primitive streak and mesoderm formation in the embryo. The canonical roles of SRF are mediated by a diverse set of context-dependent cofactors. Here, we show that SRF physically interacts with CTCF and cohesin subunits at topologically associating domain (TAD) boundaries and loop anchors. SRF promotes long-range chromatin loop formation and contributes to TAD insulation. In embryonic stem cells (ESCs), SRF associates with SOX2 and NANOG and contributes to the formation of three-dimensional (3D) pluripotency hubs. Our findings reveal additional roles of SRF in higher-order chromatin organization.<br />Competing Interests: Declaration of interests The authors declare no competing interests.<br /> (Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Subjects :
- Animals
Mice
CCCTC-Binding Factor metabolism
Humans
Pluripotent Stem Cells metabolism
Pluripotent Stem Cells cytology
Chromosomal Proteins, Non-Histone metabolism
Cell Cycle Proteins metabolism
Cell Cycle Proteins genetics
Cohesins
Cell Differentiation
Protein Binding
Embryonic Stem Cells metabolism
Embryonic Stem Cells cytology
Serum Response Factor metabolism
Chromatin metabolism
Nanog Homeobox Protein metabolism
Nanog Homeobox Protein genetics
SOXB1 Transcription Factors metabolism
SOXB1 Transcription Factors genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2211-1247
- Volume :
- 43
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Cell reports
- Publication Type :
- Academic Journal
- Accession number :
- 39392751
- Full Text :
- https://doi.org/10.1016/j.celrep.2024.114846