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Mechanisms of epigenomic and functional convergence between glucocorticoid- and IL4-driven macrophage programming.

Authors :
Deochand DK
Dacic M
Bale MJ
Daman AW
Chaudhary V
Josefowicz SZ
Oliver D
Chinenov Y
Rogatsky I
Source :
Nature communications [Nat Commun] 2024 Oct 18; Vol. 15 (1), pp. 9000. Date of Electronic Publication: 2024 Oct 18.
Publication Year :
2024

Abstract

Macrophages adopt distinct phenotypes in response to environmental cues, with type-2 cytokine interleukin-4 promoting a tissue-repair homeostatic state (M2 <subscript>IL4</subscript> ). Glucocorticoids (GC), widely used anti-inflammatory therapeutics, reportedly impart a similar phenotype (M2 <subscript>GC</subscript> ), but how such disparate pathways may functionally converge is unknown. We show using integrative functional genomics that M2 <subscript>IL4</subscript> and M2 <subscript>GC</subscript> transcriptomes share a striking overlap mirrored by a shift in chromatin landscape in both common and signal-specific gene subsets. This core homeostatic program is enacted by transcriptional effectors KLF4 and the glucocorticoid receptor, whose genome-wide occupancy and actions are integrated in a stimulus-specific manner by the nuclear receptor cofactor GRIP1. Indeed, many of the M2 <subscript>IL4</subscript> :M2 <subscript>GC</subscript> -shared transcriptomic changes were GRIP1-dependent. Consistently, GRIP1 loss attenuated phagocytic activity of both populations in vitro and macrophage tissue-repair properties in the murine colitis model in vivo. These findings provide a mechanistic framework for homeostatic macrophage programming by distinct signals, to better inform anti-inflammatory drug design.<br /> (© 2024. The Author(s).)

Details

Language :
English
ISSN :
2041-1723
Volume :
15
Issue :
1
Database :
MEDLINE
Journal :
Nature communications
Publication Type :
Academic Journal
Accession number :
39424780
Full Text :
https://doi.org/10.1038/s41467-024-52942-x