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Mechanisms of epigenomic and functional convergence between glucocorticoid- and IL4-driven macrophage programming.
- Source :
-
Nature communications [Nat Commun] 2024 Oct 18; Vol. 15 (1), pp. 9000. Date of Electronic Publication: 2024 Oct 18. - Publication Year :
- 2024
-
Abstract
- Macrophages adopt distinct phenotypes in response to environmental cues, with type-2 cytokine interleukin-4 promoting a tissue-repair homeostatic state (M2 <subscript>IL4</subscript> ). Glucocorticoids (GC), widely used anti-inflammatory therapeutics, reportedly impart a similar phenotype (M2 <subscript>GC</subscript> ), but how such disparate pathways may functionally converge is unknown. We show using integrative functional genomics that M2 <subscript>IL4</subscript> and M2 <subscript>GC</subscript> transcriptomes share a striking overlap mirrored by a shift in chromatin landscape in both common and signal-specific gene subsets. This core homeostatic program is enacted by transcriptional effectors KLF4 and the glucocorticoid receptor, whose genome-wide occupancy and actions are integrated in a stimulus-specific manner by the nuclear receptor cofactor GRIP1. Indeed, many of the M2 <subscript>IL4</subscript> :M2 <subscript>GC</subscript> -shared transcriptomic changes were GRIP1-dependent. Consistently, GRIP1 loss attenuated phagocytic activity of both populations in vitro and macrophage tissue-repair properties in the murine colitis model in vivo. These findings provide a mechanistic framework for homeostatic macrophage programming by distinct signals, to better inform anti-inflammatory drug design.<br /> (© 2024. The Author(s).)
- Subjects :
- Animals
Mice
Mice, Inbred C57BL
Epigenomics
Colitis genetics
Colitis metabolism
Colitis chemically induced
Nerve Tissue Proteins metabolism
Nerve Tissue Proteins genetics
Transcriptome
Mice, Knockout
Homeostasis
Male
Phagocytosis
Adaptor Proteins, Signal Transducing
Kruppel-Like Factor 4
Macrophages metabolism
Glucocorticoids pharmacology
Kruppel-Like Transcription Factors metabolism
Kruppel-Like Transcription Factors genetics
Receptors, Glucocorticoid metabolism
Receptors, Glucocorticoid genetics
Interleukin-4 metabolism
Interleukin-4 genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2041-1723
- Volume :
- 15
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Nature communications
- Publication Type :
- Academic Journal
- Accession number :
- 39424780
- Full Text :
- https://doi.org/10.1038/s41467-024-52942-x