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Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities.
- Source :
-
Journal of microbiology (Seoul, Korea) [J Microbiol] 2024 Nov; Vol. 62 (11), pp. 973-983. Date of Electronic Publication: 2024 Nov 12. - Publication Year :
- 2024
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Abstract
- We isolated three novel strains, S1 <superscript>T</superscript> , S2 <superscript>T</superscript> , and S5 <superscript>T</superscript> , from human oral cavities and identified them as distinct novel species. All these strains are facultatively anaerobic, Gram-stain-positive, and non-flagellated bacteria. Their optimal growth conditions for these strains were observed in Columbia broth (CB) at 37 °C, pH 7.0, and in the absence of NaCl. Phylogenetic analyses, employing the 16S rRNA gene and whole-genome sequencing, confirmed that all three strains belong to the genus Streptococcus. The 16S rRNA gene sequences of strains S1 <superscript>T</superscript> , S2 <superscript>T</superscript> , and S5 <superscript>T</superscript> showed the highest similarities to Streptococcus parasanguinis, 98.57%, 99.05%, and 99.05%, respectively, and the orthologous average nucleotide identity (OrthoANI) values between the three strains and S. parasanguinis were 93.82%, 93.67%, and 94.04%, respectively. The pairwise OrthoANI values between the novel strains were 94.37% (S1 <superscript>T</superscript> -S2 <superscript>T</superscript> ), 95.03% (S2 <superscript>T</superscript> -S5 <superscript>T</superscript> ), and 94.71% (S1 <superscript>T</superscript> -S5 <superscript>T</superscript> ). All strains had C <subscript>20:1</subscript> ω9c and summed feature 8 (C <subscript>18:1</subscript> ω7c and/or C <subscript>18:1</subscript> ω6c) as major cellular fatty acids. Additionally, diphosphatidylglycerol (DPG) and hydroxyphosphatidylethanolamine (OH-PE) were identified as major polar lipids. Menaquinone was undetected in all strains. The results from the phylogenetic, phenotypic, chemotaxonomic, and genotypic analyses collectively indicated that strains S1 <superscript>T</superscript> , S2 <superscript>T</superscript> , and S5 <superscript>T</superscript> represent three distinct novel species within the genus Streptococcus, and we propose the names Streptococcus dentalis sp. nov. for strain S1 <superscript>T</superscript> (= KCTC 21234 <superscript>T</superscript> = JCM 36526 <superscript>T</superscript> ), Streptococcus gingivalis sp. nov. for strain S2 <superscript>T</superscript> (= KCTC 21235 <superscript>T</superscript> = JCM 36527 <superscript>T</superscript> ), and Streptococcus lingualis sp. nov. for strain S5 <superscript>T</superscript> (= KCTC 21236 <superscript>T</superscript> = JCM 36528 <superscript>T</superscript> ).<br />Competing Interests: Declarations. Conflict of Interest: The authors declare that there are no conflicts of interest. Ethical Statements: This study was conducted following the IRB regulations at Kyung Hee University (KHSIRB-21–533).<br /> (© 2024. The Author(s), under exclusive licence to Microbiological Society of Korea.)
- Subjects :
- Humans
Sequence Analysis, DNA
Whole Genome Sequencing
Phospholipids analysis
Phylogeny
RNA, Ribosomal, 16S genetics
Fatty Acids analysis
DNA, Bacterial genetics
Streptococcus genetics
Streptococcus isolation & purification
Streptococcus classification
Mouth microbiology
Base Composition
Bacterial Typing Techniques
Subjects
Details
- Language :
- English
- ISSN :
- 1976-3794
- Volume :
- 62
- Issue :
- 11
- Database :
- MEDLINE
- Journal :
- Journal of microbiology (Seoul, Korea)
- Publication Type :
- Academic Journal
- Accession number :
- 39531154
- Full Text :
- https://doi.org/10.1007/s12275-024-00178-1