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Chromosome-level genome assembly of the cave leech Sinospelaeobdella cavatuses (Hirudinea: Haemadipsidae).
- Source :
-
Scientific data [Sci Data] 2024 Nov 13; Vol. 11 (1), pp. 1223. Date of Electronic Publication: 2024 Nov 13. - Publication Year :
- 2024
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Abstract
- Leeches are famous for their high medical value and wide environmental adaptability. Among them, cave leeches are a very fascinating and rare group, which is an important component in the study of adaptive evolution of leeches. However, no study has yet reported a reference genome for this group. In this study, we assembled a high-quality chromosome-level genome of the cave terrestrial leech Sinospelaeobdella cavatuses, through Illumina and PacBio sequencing, alongside chromosome conformation capture techniques. The resulting genome spans 153.67 Mb across 9 pseudochromosomes(range: 11.33 to 23.53 Mb), with a mounting rate of up to 95.37% and features an N50 length of 17.15 Mb. This genome is composed of 35.16% repetitive elements and contains 21180 predicted protein-coding genes. Decoding the S. cavatuses genome not only promotes future studies on study of its phylogeny, evolution, and behavior, but also provides valuable resources for in-depth investigation on adaptive evolution of leech.<br />Competing Interests: Competing interests The authors declare no competing interests.<br /> (© 2024. The Author(s).)
- Subjects :
- Animals
Caves
Phylogeny
Chromosomes
Genome
Leeches genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2052-4463
- Volume :
- 11
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Scientific data
- Publication Type :
- Academic Journal
- Accession number :
- 39537640
- Full Text :
- https://doi.org/10.1038/s41597-024-04007-3