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Genome‑wide identifcation and expression analysis of growth-regulating factors under drought in Brassica juncea.
- Source :
-
Scientific reports [Sci Rep] 2024 Dec 01; Vol. 14 (1), pp. 29835. Date of Electronic Publication: 2024 Dec 01. - Publication Year :
- 2024
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Abstract
- Growth-regulating factors (GRFs) are plant-specific transcription factors involved in the regulation of plant growth, development, and abiotic stress processes. However, the function of Brassica juncea (L.) Czern & Coss GRFs remain largely unknown. In this study, 34 BjGRF genes were identified in B. juncea. BjGRF members of the same subfamily were found to share a similar motif composition and gene structure. In total, 663 cis-acting elements were found in the promoter regions of BjGRF genes, which were related to light response, hormone response, environmental stresses, and plant growth/development. Additionally, 48 pairs of segmental duplication genes were identified during gene duplication events, and no tandemly duplicated genes were identified. qRT-PCR analysis showed that the 34 BjGRF genes were primarily expressed in the roots, followed by the leaves. Furthermore, the 10 BjGRF genes were screened in response to drought stress, and the expression patterns of the genes were relatively consistent, with a maximum expression level at 3 or 24 h, and the selected BjGRF03 and BjGRF32 might be involved in drought stress. This preliminary study clarifies the response of the BjGRF gene family to drought stress and provides ideas for further analyses of the biological functions of BjGRF genes.<br />Competing Interests: Declarations. Competing interests: The authors declare no competing interests. Ethics statement: The collection of specimens conformed to the requirement of international ethics, which did not incur any damage to the environment and the species itself. The process and purpose of this experimental research were in line with the rules and regulations of our institute. There are no ethical issues or specific permissions are required.<br /> (© 2024. The Author(s).)
- Subjects :
- Transcription Factors genetics
Transcription Factors metabolism
Genome, Plant
Phylogeny
Gene Duplication
Gene Expression Profiling
Promoter Regions, Genetic
Mustard Plant genetics
Mustard Plant growth & development
Gene Expression Regulation, Plant
Droughts
Plant Proteins genetics
Plant Proteins metabolism
Stress, Physiological genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2045-2322
- Volume :
- 14
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Scientific reports
- Publication Type :
- Academic Journal
- Accession number :
- 39617772
- Full Text :
- https://doi.org/10.1038/s41598-024-80941-x