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Detection of HIV-1 RNA in plasma and serum samples using the NASBA amplification system compared to RNA-PCR.
- Source :
-
Journal of virological methods [J Virol Methods] 1995 Mar; Vol. 52 (1-2), pp. 121-32. - Publication Year :
- 1995
-
Abstract
- The presence of HIV-1 RNA in the plasma and serum of European and African patients was monitored using RNA-polymerase chain reaction (RNA-PCR) and the new isothermal NASBA nucleic acid amplification system encompassing a gel-based detection assay (ELGA). Identical RNA extraction procedures, provided by the NASBA amplification system, were used for both methods. The detection limit for HIV-1 RNA, measured on a 10-fold dilution series of spiked HIVIIIB in negative plasma, was about 0.05 CCID50 per test for both methods. Both NASBA and RNA-PCR were more sensitive than a p24 assay for the detection of circulating HIV-1 virus in blood: 17 of the 34 (50%) p24 antigen-tested seropositives were p24-positive while 32 (94%) were positive by NASBA and 30 (88%) by RNA-PCR. Among the 45 seropositives, 34 of which were tested for p24 antigen, 43 (96%) were positive by NASBA and 41 (91%) by RNA-PCR. Almost all seropositives had a detectable viral load in 100 microliters plasma. Lower viral loads were only encountered in some healthy seropositives with a higher CD4 count. There was no cross-reactivity with HIV-2 or HIV-I with both the RNA-PCR and NASBA. The extraction method used permitted the detection of HIV-1 RNA equally well in serum and in plasma with heparin or EDTA.
- Subjects :
- Africa ethnology
Algorithms
Base Sequence
Cell Line
Cross Reactions
DNA Primers
Europe
Genes, gag
HIV Core Protein p24 blood
HIV-1 genetics
Humans
Molecular Sequence Data
Nucleic Acid Amplification Techniques
Polymerase Chain Reaction methods
Reproducibility of Results
Sensitivity and Specificity
HIV Seropositivity diagnosis
HIV-1 isolation & purification
RNA, Viral blood
Subjects
Details
- Language :
- English
- ISSN :
- 0166-0934
- Volume :
- 52
- Issue :
- 1-2
- Database :
- MEDLINE
- Journal :
- Journal of virological methods
- Publication Type :
- Academic Journal
- Accession number :
- 7769025
- Full Text :
- https://doi.org/10.1016/0166-0934(94)00151-6