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Protein residue linking in a single spectrum for magic-angle spinning NMR assignment.

Authors :
Andreas, Loren
Stanek, Jan
Marchand, Tanguy
Bertarello, Andrea
Paepe, Diane
Lalli, Daniela
Krejčíková, Magdaléna
Doyen, Camille
Öster, Carl
Knott, Benno
Wegner, Sebastian
Engelke, Frank
Felli, Isabella
Pierattelli, Roberta
Dixon, Nicholas
Emsley, Lyndon
Herrmann, Torsten
Pintacuda, Guido
Source :
Journal of Biomolecular NMR; Jul2015, Vol. 62 Issue 3, p253-261, 9p
Publication Year :
2015

Abstract

Here we introduce a new pulse sequence for resonance assignment that halves the number of data sets required for sequential linking by directly correlating sequential amide resonances in a single diagonal-free spectrum. The method is demonstrated with both microcrystalline and sedimented deuterated proteins spinning at 60 and 111 kHz, and a fully protonated microcrystalline protein spinning at 111 kHz, with as little as 0.5 mg protein sample. We find that amide signals have a low chance of ambiguous linkage, which is further improved by linking in both forward and backward directions. The spectra obtained are amenable to automated resonance assignment using general-purpose software such as UNIO-MATCH. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
09252738
Volume :
62
Issue :
3
Database :
Complementary Index
Journal :
Journal of Biomolecular NMR
Publication Type :
Academic Journal
Accession number :
103670256
Full Text :
https://doi.org/10.1007/s10858-015-9956-1