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Non-contiguous-Finished Genome Sequence and Description of Paenibacillus camerounensis sp. nov.

Authors :
Keita, Mamadou
Padhmanabhan, Roshan
Robert, Catherine
Delaporte, Eric
Raoult, Didier
Fournier, Pierre-Edouard
Bittar, Fadi
Source :
Microbial Ecology; May2016, Vol. 71 Issue 4, p990-998, 9p
Publication Year :
2016

Abstract

Strain G4 was isolated from the stool sample of a wild gorilla ( Gorilla gorilla gorilla) from Cameroon. It is a facultative anaerobic, Gram-negative, rod-shaped bacterium. This strain exhibits a 16S rRNA nucleotide sequence similarity of 97.48 % with Paenibacillus typhae, the phylogenetically closest species with standing nomenclature. Moreover, the strain G4 presents some phenotypic differences when compared to other Paenibacillus species and shows a low MALDI-TOF Mass Spectrometry score that does not allow any identification. Thus, it is likely that this strain represents a new species. Here, we describe the characteristics of this organism, complete genome sequence, and annotation. The 6,933,847 bp size genome (1 chromosome but no plasmid) contains 5972 protein-coding genes and 54 RNAs genes, including 44 tRNA genes. In addition, digital DNA-DNA hybridization values for the genome of the strain G4 against the closest Paenibacillus genomes range between 19.7 and 22.1, once again confirming its new status as a new species. On the basis of these polyphasic data, consisting of phenotypic and genomic analyses, we propose the creation of Paenibacillus camerounensis sp. nov. that contains the strain G4. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00953628
Volume :
71
Issue :
4
Database :
Complementary Index
Journal :
Microbial Ecology
Publication Type :
Academic Journal
Accession number :
114308995
Full Text :
https://doi.org/10.1007/s00248-015-0722-4