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Identifying robust hysteresis in networks.

Authors :
Gedeon, Tomáš
Cummins, Bree
Harker, Shaun
Mischaikow, Konstantin
Source :
PLoS Computational Biology; 4/23/2018, Vol. 14 Issue 3, p1-23, 23p, 1 Diagram, 2 Charts, 3 Graphs
Publication Year :
2018

Abstract

We present a new modeling and computational tool that computes rigorous summaries of network dynamics over large sets of parameter values. These summaries, organized in a database, can be searched for observed dynamics, e.g., bistability and hysteresis, to discover parameter regimes over which they are supported. We illustrate our approach on several networks underlying the restriction point of the cell cycle in humans and yeast. We rank networks by how robustly they support hysteresis, which is the observed phenotype. We find that the best 6-node human network and the yeast network share similar topology and robustness of hysteresis, in spite of having no homology between the corresponding nodes of the network. Our approach provides a new tool linking network structure and dynamics. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
1553734X
Volume :
14
Issue :
3
Database :
Complementary Index
Journal :
PLoS Computational Biology
Publication Type :
Academic Journal
Accession number :
129235994
Full Text :
https://doi.org/10.1371/journal.pcbi.1006121