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A multiethnic genome-wide association study of primary open-angle glaucoma identifies novel risk loci.

Authors :
Choquet, Hélène
Paylakhi, Seyyedhassan
Kneeland, Stephen C.
Thai, Khanh K.
Hoffmann, Thomas J.
Jie Yin
Kvale, Mark N.
Banda, Yambazi
Tolman, Nicholas G.
Williams, Pete A.
Schaefer, Catherine
Melles, Ronald B.
Risch, Neil
John, Simon W. M.
Nair, K. Saidas
Jorgenson, Eric
Source :
Nature Communications; 6/11/2018, Vol. 9 Issue 1, p1-14, 14p
Publication Year :
2018

Abstract

Primary open-angle glaucoma (POAG) is a leading cause of irreversible vision loss, yet much of the genetic risk remains unaccounted for, especially in African-Americans who have a higher risk for developing POAG. We conduct a multiethnic genome-wide association study (GWAS) of POAG in the GERA cohort, with replication in the UK Biobank (UKB), and vice versa, GWAS in UKB with replication in GERA. We identify 24 loci (P < 5.0 × 10<superscript>−8</superscript>), including 14 novel, of which 9 replicate (near FMNL2, PDE7B, TMTC2, IKZF2, CADM2, DGKG, ANKH, EXOC2, and LMX1B). Functional studies support intraocular pressure-related influences of FMNL2 and LMX1B, with certain Lmx1b mutations causing high IOP and glaucoma resembling POAG in mice. The newly identified loci increase the proportion of variance explained in each GERA race/ethnicity group, with the largest gain in African-Americans (0.5–3.1%). A metaanalysis combining GERA and UKB identifies 24 additional loci. Our study provides important insights into glaucoma pathogenesis. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20411723
Volume :
9
Issue :
1
Database :
Complementary Index
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
138631434
Full Text :
https://doi.org/10.1038/s41467-018-04555-4