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The complete chloroplast genome of Vitis amurensis Rupr., an economic plant to China.

Authors :
Xie, Jun
Guo, Xiaojing
Wang, Rong
Liu, Jing
Liu, Yujuan
Qiao, Gaixia
Xu, Meilong
Source :
Mitochondrial DNA: Resources; Dec2019, Vol. 4 Issue 2, p3683-3684, 2p
Publication Year :
2019

Abstract

The chloroplast (cp) genome sequence of Vitis amurensis has been characterized from Illumina pair-end sequencing. The complete cp genome was 161,014 bp in length, containing a large single-copy region (LSC) of 89,239 bp and a small single-copy region (SSC) of 19,067 bp, which were separated by a pair of 26,354 bp inverted repeat regions (IRs). The genome contained 133 genes, including 88 protein coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 37.4%, while the corresponding values of the LSC, SSC, and IR regions are 35.3%, 31.7%, and 43.0%, respectively. Further, phylogenetic analysis suggested that the V. amurensis was sister to Vitis coignetiae. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
23802359
Volume :
4
Issue :
2
Database :
Complementary Index
Journal :
Mitochondrial DNA: Resources
Publication Type :
Academic Journal
Accession number :
141314378
Full Text :
https://doi.org/10.1080/23802359.2019.1678431