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Coronapp: A web application to annotate and monitor SARS‐CoV‐2 mutations.

Authors :
Mercatelli, Daniele
Triboli, Luca
Fornasari, Eleonora
Ray, Forest
Giorgi, Federico M.
Source :
Journal of Medical Virology; May2021, Vol. 93 Issue 5, p3238-3245, 8p
Publication Year :
2021

Abstract

The avalanche of genomic data generated from the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) virus requires the development of tools to detect and monitor its mutations across the world. Here, we present a webtool, coronapp, dedicated to easily processing user‐provided SARS‐CoV‐2 genomic sequences and visualizing the current worldwide status of SARS‐CoV‐2 mutations. The webtool allows users to highlight mutations and categorize them by frequency, country, genomic location and effect on protein sequences, and to monitor their presence in the population over time. The tool is available at http://giorgilab.unibo.it/coronannotator/ for the annotation of user‐provided sequences. The full code is freely shared at https://github.com/federicogiorgi/giorgilab/tree/master/coronannotator. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
01466615
Volume :
93
Issue :
5
Database :
Complementary Index
Journal :
Journal of Medical Virology
Publication Type :
Academic Journal
Accession number :
149599140
Full Text :
https://doi.org/10.1002/jmv.26678