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A Genetically Encoded Two‐Dimensional Infrared Probe for Enzyme Active‐Site Dynamics.

Authors :
Wang, Li
Zhang, Jia
Han, Ming‐Jie
Zhang, Lu
Chen, Chao
Huang, Aiping
Xie, Ruipei
Wang, Guosheng
Zhu, Jiangrui
Wang, Yuchuan
Liu, Xiaohong
Zhuang, Wei
Li, Yunliang
Wang, Jiangyun
Source :
Angewandte Chemie International Edition; 5/10/2021, Vol. 60 Issue 20, p11143-11147, 5p
Publication Year :
2021

Abstract

While two‐dimensional infrared (2D‐IR) spectroscopy is uniquely suitable for monitoring femtosecond (fs) to picosecond (ps) water dynamics around static protein structures, its utility for probing enzyme active‐site dynamics is limited due to the lack of site‐specific 2D‐IR probes. We demonstrate the genetic incorporation of a novel 2D‐IR probe, m‐azido‐L‐tyrosine (N3Y) in the active‐site of DddK, an iron‐dependent enzyme that catalyzes the conversion of dimethylsulfoniopropionate to dimethylsulphide. Our results show that both the oxidation of active‐site iron to FeIII, and the addition of denaturation reagents, result in significant decrease in enzyme activity and active‐site water motion confinement. As tyrosine residues play important roles, including as general acids and bases, and electron transfer agents in many key enzymes, the genetically encoded 2D‐IR probe N3Y should be broadly applicable to investigate how the enzyme active‐site motions at the fs–ps time scale direct reaction pathways to facilitating specific chemical reactions. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14337851
Volume :
60
Issue :
20
Database :
Complementary Index
Journal :
Angewandte Chemie International Edition
Publication Type :
Academic Journal
Accession number :
150130885
Full Text :
https://doi.org/10.1002/anie.202016880