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Clostridium culturomicium sp. nov. and Clostridium jeddahitimonense sp. nov., novel members of the Clostridium genus isolated from the stool of an obese Saudi Arabian.

Authors :
Kieu, Hoang Thong
Garrigou, Noémie
Fadlane, Amael
Brechard, Ludivine
Armstrong, Nicholas
Decloquement, Philippe
Yasir, Muhammad
Azhar, Esam Ibraheem
Al-Masaudi, Saad B.
Lagier, Jean-Christophe
Tidjani Alou, Maryam
Raoult, Didier
Source :
Current Microbiology; Sep2021, Vol. 78 Issue 9, p3586-3595, 10p
Publication Year :
2021

Abstract

Taxono-genomics is an innovative concept coined for the description of new bacterial species. Phenotypic characteristics were combined with a genomic approach to describe two new species within the Clostridium senso stricto genus: Clostridium culturomicium strain CL-6<superscript>T</superscript> and Clostridium jeddahitimonense strain CL-2<superscript>T</superscript>, both isolated from the gut microbiota of an obese man from Saudi Arabia. Strains CL-6<superscript>T</superscript> and CL-2<superscript>T</superscript> shared a similarity of 98.4% with the 16S rRNA gene of Clostridium subterminale strain JCM 1417<superscript>T</superscript> (accession number NR113027) and 98% with that of Clostridium disporicum strain DS1<superscript>T</superscript> (accession number NR026491), respectively. The highest OrthoANI values were shared with Clostridium punense for strain CL-6<superscript>T</superscript> (70.8%) and with Clostridium disporicum for strain CL-2<superscript>T</superscript> (87.1%). Additionally, strain CL-6<superscript>T</superscript> and strain CL-2<superscript>T</superscript> shared a 16S rRNA similarity of 91.4%. Both strains were anaerobic, spore-forming and Gram-stain-positive non-motile bacilli. The genome of Clostridium culturomicium strain CL-6<superscript>T</superscript> is 4,325,182 bp long with 32.2% GC content. As for Clostridium jeddahitimonense strain CL-2<superscript>T</superscript>, the genome is 4,074,758 bp long with 29.2% GC content. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03438651
Volume :
78
Issue :
9
Database :
Complementary Index
Journal :
Current Microbiology
Publication Type :
Academic Journal
Accession number :
151900286
Full Text :
https://doi.org/10.1007/s00284-021-02616-4