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Characterization of the complete chloroplast genome of Actinidia hemsleyana.
- Source :
- Mitochondrial DNA: Resources; Nov 2021, Vol. 6 Issue 11, p3259-3260, 2p
- Publication Year :
- 2021
-
Abstract
- The completed chloroplast genome sequence of Actinidia hemsleyana, collected from eastern China, was firstly determined using next-generation sequencing (NGS) and bioinformatic analysis. The length of cp genome was 156,845 bp, including a large single-copy (LSC) region of 88,666 bp and a small single-copy (SSC) region of 20,543 bp, which were separated by a pair of inverted repeats (IRs) of 23,818 bp. The cp genome contained 132 genes, including 83 protein-coding genes, 41 tRNA genes, and 8 rRNA genes. The overall GC content was 37.19%, whereas the corresponding values of the LSC, SSC, and IR regions were 35.46%, 31.09%, and 43.06%, respectively. Phylogenetic analysis based on whole cp genome sequences of 20 Actinidia species showed that A. hemsleyana has the closest relationship with A.latifolia. [ABSTRACT FROM AUTHOR]
- Subjects :
- CHLOROPLAST DNA
WHOLE genome sequencing
ACTINIDIA
NUCLEOTIDE sequencing
Subjects
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 6
- Issue :
- 11
- Database :
- Complementary Index
- Journal :
- Mitochondrial DNA: Resources
- Publication Type :
- Academic Journal
- Accession number :
- 153408200
- Full Text :
- https://doi.org/10.1080/23802359.2021.1993100