Back to Search Start Over

Characterization of the complete chloroplast genome of Actinidia hemsleyana.

Authors :
Xiaoqiong, Qi
Xiaodong, Xie
Mingjuan, Yang
Atak, Arif
Caihong, Zhong
Dawei, Li
Source :
Mitochondrial DNA: Resources; Nov 2021, Vol. 6 Issue 11, p3259-3260, 2p
Publication Year :
2021

Abstract

The completed chloroplast genome sequence of Actinidia hemsleyana, collected from eastern China, was firstly determined using next-generation sequencing (NGS) and bioinformatic analysis. The length of cp genome was 156,845 bp, including a large single-copy (LSC) region of 88,666 bp and a small single-copy (SSC) region of 20,543 bp, which were separated by a pair of inverted repeats (IRs) of 23,818 bp. The cp genome contained 132 genes, including 83 protein-coding genes, 41 tRNA genes, and 8 rRNA genes. The overall GC content was 37.19%, whereas the corresponding values of the LSC, SSC, and IR regions were 35.46%, 31.09%, and 43.06%, respectively. Phylogenetic analysis based on whole cp genome sequences of 20 Actinidia species showed that A. hemsleyana has the closest relationship with A.latifolia. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
23802359
Volume :
6
Issue :
11
Database :
Complementary Index
Journal :
Mitochondrial DNA: Resources
Publication Type :
Academic Journal
Accession number :
153408200
Full Text :
https://doi.org/10.1080/23802359.2021.1993100