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overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis.

Authors :
Cushnan, Dominic
Bennett, Oscar
Berka, Rosalind
Bertolli, Ottavia
Chopra, Ashwin
Dorgham, Samie
Favaro, Alberto
Ganepola, Tara
Halling-Brown, Mark
Imreh, Gergely
Jacob, Joseph
Jefferson, Emily
Lemarchand, François
Schofield, Daniel
Wyatt, Jeremy C
Collaborative, NCCID
Source :
GigaScience; Nov2021, Vol. 10 Issue 11, p1-20, 20p
Publication Year :
2021

Abstract

Background The National COVID-19 Chest Imaging Database (NCCID) is a centralized database containing mainly chest X-rays and computed tomography scans from patients across the UK. The objective of the initiative is to support a better understanding of the coronavirus SARS-CoV-2 disease (COVID-19) and the development of machine learning technologies that will improve care for patients hospitalized with a severe COVID-19 infection. This article introduces the training dataset, including a snapshot analysis covering the completeness of clinical data, and availability of image data for the various use-cases (diagnosis, prognosis, longitudinal risk). An additional cohort analysis measures how well the NCCID represents the wider COVID-19–affected UK population in terms of geographic, demographic, and temporal coverage. Findings The NCCID offers high-quality DICOM images acquired across a variety of imaging machinery; multiple time points including historical images are available for a subset of patients. This volume and variety make the database well suited to development of diagnostic/prognostic models for COVID-associated respiratory conditions. Historical images and clinical data may aid long-term risk stratification, particularly as availability of comorbidity data increases through linkage to other resources. The cohort analysis revealed good alignment to general UK COVID-19 statistics for some categories, e.g. sex, whilst identifying areas for improvements to data collection methods, particularly geographic coverage. Conclusion The NCCID is a growing resource that provides researchers with a large, high-quality database that can be leveraged both to support the response to the COVID-19 pandemic and as a test bed for building clinically viable medical imaging models. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
2047217X
Volume :
10
Issue :
11
Database :
Complementary Index
Journal :
GigaScience
Publication Type :
Academic Journal
Accession number :
153984778
Full Text :
https://doi.org/10.1093/gigascience/giab076