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Tree House Explorer: A Novel Genome Browser for Phylogenomics.

Authors :
Harris, Andrew J
Foley, Nicole M
Williams, Tiffani L
Murphy, William J
Source :
Molecular Biology & Evolution; Jun2022, Vol. 39 Issue 6, p1-11, 11p
Publication Year :
2022

Abstract

Tree House Explorer (THEx) is a genome browser that integrates phylogenomic data and genomic annotations into a single interactive platform for combined analysis. THEx allows users to visualize genome-wide variation in evolutionary histories and genetic divergence on a chromosome-by-chromosome basis, with continuous sliding window comparisons to gene annotations, recombination rates, and other user-specified, highly customizable feature annotations. THEx provides a new platform for interactive phylogenomic data visualization to analyze and interpret the diverse evolutionary histories woven throughout genomes. Hosted on Conda, THEx integrates seamlessly into new or pre-existing workflows. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
07374038
Volume :
39
Issue :
6
Database :
Complementary Index
Journal :
Molecular Biology & Evolution
Publication Type :
Academic Journal
Accession number :
157756292
Full Text :
https://doi.org/10.1093/molbev/msac130