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Soil texture is a stronger driver of the maize rhizosphere microbiome and extracellular enzyme activities than soil depth or the presence of root hairs.

Authors :
Yim, Bunlong
Ibrahim, Zeeshan
Rüger, Lioba
Ganther, Minh
Maccario, Lorrie
Sørensen, Søren J.
Heintz-Buschart, Anna
Tarkka, Mika T.
Vetterlein, Doris
Bonkowski, Michael
Blagodatskaya, Evgenia
Smalla, Kornelia
Source :
Plant & Soil; Sep2022, Vol. 478 Issue 1/2, p229-251, 23p, 4 Diagrams, 5 Charts, 3 Graphs
Publication Year :
2022

Abstract

Aims: Different drivers are known to shape rhizosphere microbiome assembly. How soil texture (Texture) and presence or lack of root hairs (Root Hair) of plants affect the rhizosphere microbiome assembly and soil potential extracellular enzyme activities (EEA) at defined rooting depth (Depth) is still a knowledge gap. We investigated effects of these drivers on microbial assembly in rhizosphere and on potential EEA in root-affected soil of maize. Methods: Samples were taken from three depths of root hair defective mutant rth3 and wild-type WT maize planted on loam and sand in soil columns after 22 days. Rhizosphere bacterial, archaeal, fungal and cercozoan communities were analysed by sequencing of 16S rRNA gene, ITS and 18S rRNA gene fragments. Soil potential EEA of ß-glucosidase, acid phosphatase and chitinase were estimated using fluorogenic substrates. Results: The bacterial, archaeal and cercozoan alpha- and beta-diversities were significantly and strongly altered by Texture, followed by Depth and Root Hair. Texture and Depth had a small impact on fungal assembly, and only fungal beta-diversity was significantly affected. Significant impacts by Depth and Root Hair on beta-diversity and relative abundances at taxonomic levels of bacteria, archaea, fungi and cercozoa were dependent on Texture. Likewise, the patterns of potential EEA followed the trends of microbial communities, and the potential EEA correlated with the relative abundances of several taxa. Conclusions: Texture was the strongest driver of rhizosphere microbiome and of soil potential EEA, followed by Depth and Root Hair, similarly to findings in maize root architecture and plant gene expression studies. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
0032079X
Volume :
478
Issue :
1/2
Database :
Complementary Index
Journal :
Plant & Soil
Publication Type :
Academic Journal
Accession number :
159739807
Full Text :
https://doi.org/10.1007/s11104-022-05618-8