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The complete chloroplast genome of Urtica angustifolia Fisch. ex Hornem. (Urticaceae), an important kind of traditional Chinese medicine in China.

Authors :
Liu, Mu
Lu, Jinsen
Li, Baoyong
Zhang, Lvshui
Source :
Mitochondrial DNA: Resources; Jan2023, Vol. 8 Issue 1, p116-118, 3p
Publication Year :
2023

Abstract

Urtica angustifolia Fisch. ex Hornem. is an important Chinese medicine. Here, the complete chloroplast genome of U. angustifolia was assembled and characterized. The length of the chloroplast genome was 146,679 bp with the typical quadripartite structure, containing two inverted repeats (IRs) of 24,595 bp separated by a large single-copy (LSC) region of 79,820 bp and a small single-copy (SSC) region of 17,669 bp. The whole chloroplast genome of U. angustifolia contains 111 genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Nucleotide variability analysis identified three hotspot regions (trnK-rps16, ndhF-rps32, and ycf1b) for genomic divergence and 52 simple sequence repeats. Phylogenetic analysis based on the complete chloroplast genomes exhibited that U. angustifolia formed a clade with Urtica lobatifolia and Hesperocnide tenella. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
23802359
Volume :
8
Issue :
1
Database :
Complementary Index
Journal :
Mitochondrial DNA: Resources
Publication Type :
Academic Journal
Accession number :
161688638
Full Text :
https://doi.org/10.1080/23802359.2022.2057246