Back to Search Start Over

Psychromarinibacter sediminicola sp. nov., a novel moderately halophilic, metabolically diverse bacterium isolated from a solar saltern sediment, and comparison between members of family Roseobacteraceae.

Authors :
Wang, Yu-Hui
Liu, Jun-Cheng
Du, Yi-Heng
Xu, Jin-Hao
Du, Zong-Jun
Ye, Meng-Qi
Source :
Archives of Microbiology; Oct2023, Vol. 205 Issue 10, p1-17, 17p
Publication Year :
2023

Abstract

Known for its species abundance and evolutionary status complexity, family Roseobacteraceae is an important subject of many studies on the discovery, identification, taxonomic status, and ecological properties of marine bacteria. This study compared and analyzed the phylogenetic, genomic, biochemical, and chemo taxonomical properties of seven species from three genera (Psychromarinibacter, Lutimaribacter, and Maritimibacter) of the family Roseobacteraceae. Moreover, a novel strain, named C21-152<superscript>T</superscript> was isolated from solar saltern sediment in Weihai, China. The values of 16S rRNA gene sequence similarity, the average nucleotide identity (ANI), the average amino acid identity (AAI), and the digital DNA–DNA hybridization (dDDH) between genomes of the novel strain and Psychromarinibacter halotolerans MCCC 1K03203<superscript>T</superscript> were 97.19, 78.49, 73.45, and 21.90%, respectively. Genome sequencing of strain C21-152<superscript>T</superscript> revealed a complete Sox enzyme system related to thiosulfate oxidization as well as a complete pathway for the final conversion of hydroxyproline to α-ketoglutarate. In addition, strain C21-152<superscript>T</superscript> was resistant to many antibiotics and had the ability to survive below 13% salinity. This strain had versatile survival strategies in saline environments including salt-in, compatible solute production and compatible solute transport. Some of its physiological features enriched and complemented the knowledge of the characteristics of the genus Psychromarinibacter. Optimum growth of strain C21-152<superscript>T</superscript> occurred at 37 ℃, with 5–6% (w/v) NaCl and at pH 7.5. According to the results of the phenotypic, chemotaxonomic characterization, phylogenetic properties and genome analysis, strain C21-152<superscript>T</superscript> should represent a novel specie of the genus Psychromarinibacter, for which the name Psychromarinibacter sediminicola sp. nov. is proposed. The type strain is C21-152<superscript>T</superscript> (= MCCC 1H00808<superscript>T</superscript> = KCTC 92746<superscript>T</superscript> = SDUM1063002<superscript>T</superscript>). [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03028933
Volume :
205
Issue :
10
Database :
Complementary Index
Journal :
Archives of Microbiology
Publication Type :
Academic Journal
Accession number :
171910489
Full Text :
https://doi.org/10.1007/s00203-023-03672-z