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Development of a prognostic signature for immune-associated genes in bladder cancer and exploring potential drug findings.

Authors :
Xiaoqin, Zhang
Zhouqi, Lu
Huan, Pan
Xinyi, Feng
Bin, Shen
Jiming, Wu
Shihui, Liu
Bangwei, Zhou
Jing, Jin
Yi, He
Jinlai, Gao
Source :
International Urology & Nephrology; Feb2024, Vol. 56 Issue 2, p483-497, 15p
Publication Year :
2024

Abstract

Background: Bladder cancer, predominantly affecting men, is a prevalent malignancy of the urinary system. Although platinum-based chemotherapy has demonstrated certain enhancements in overall survival when compared to surgery alone, the efficacy of treatments is impeded by the unfavorable side effects of conventional chemotherapy medications. Nonetheless, immunotherapy exhibits potential in the treatment of bladder cancer. Methods: To create an immune-associated prognostic signature for bladder cancer, bioinformatics analyses were performed utilizing The Cancer Genome Atlas (TCGA) database in this study. By identifying differential gene expressions between the high-risk and low-risk groups, a potential therapeutic drug was predicted using the Connectivity Map database. Subsequently, the impact of this drug on the growth of T24 cells was validated through MTT assay and 3D cell culture techniques. Results: The signature included 1 immune-associated LncRNA (NR2F1-AS1) and 16 immune-associated mRNAs (DEFB133, RBP7, PDGFRA, CGB3, PDGFD, SCG2, ADCYAP1R1, OPRL1, PGR, PSMD1, TANK, PRDX1, ADIPOR2, S100A8, AHNAK, EGFR). Based on the assessment of risk scores, the patients were classified into cohorts of low-risk and high-risk individuals. The cohort with low risk demonstrated a considerably higher likelihood of survival in comparison to the group with high risk. Furthermore, variations in immune infiltration were noted among the two categories. Cephaeline, a possible medication, was discovered by analyzing variations in gene expression. It exhibited promise in suppressing the viability and growth of T24 bladder cancer cells. Conclusion: The novel predictive pattern allows for efficient categorization of patients with bladder cancer, enabling focused and rigorous treatment for those expected to have a worse prognosis. The discovery of a possible curative medication establishes a basis for forthcoming immunotherapy trials in bladder cancer. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03011623
Volume :
56
Issue :
2
Database :
Complementary Index
Journal :
International Urology & Nephrology
Publication Type :
Academic Journal
Accession number :
175005194
Full Text :
https://doi.org/10.1007/s11255-023-03796-7