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Deep learning classification for macrophage subtypes through cell migratory pattern analysis.

Authors :
Kesapragada, Manasa
Yao-Hui Sun
Zlobina, Ksenia
Recendez, Cynthia
Fregoso, Daniel
Hsin-Ya Yang
Aslankoohi, Elham
Isseroff, Rivkah
Rolandi, Marco
Min Zhao
Gomez, Marcella
Source :
Frontiers in Cell & Developmental Biology; 2024, p1-9, 9p
Publication Year :
2024

Abstract

Macrophages can exhibit pro-inflammatory or pro-reparatory functions, contingent upon their specific activation state. This dynamic behavior empowers macrophages to engage in immune reactions and contribute to tissue homeostasis. Understanding the intricate interplay between macrophage motility and activation status provides valuable insights into the complex mechanisms that govern their diverse functions. In a recent study, we developed a classification method based on morphology, which demonstrated that movement characteristics, including speed and displacement, can serve as distinguishing factors for macrophage subtypes. In this study, we develop a deep learning model to explore the potential of classifying macrophage subtypes based solely on raw trajectory patterns. The classification model relies on the time series of x-y coordinates, as well as the distance traveled and net displacement. We begin by investigating the migratory patterns of macrophages to gain a deeper understanding of their behavior. Although this analysis does not directly inform the deep learning model, it serves to highlight the intricate and distinct dynamics exhibited by different macrophage subtypes, which cannot be easily captured by a finite set of motility metrics. Our study uses cell trajectories to classify three macrophage subtypes: M0, M1, and M2. This advancement holds promising implications for the future, as it suggests the possibility of identifying macrophage subtypes without relying on shape analysis. Consequently, it could potentially eliminate the necessity for highquality imaging techniques and provide more robust methods for analyzing inherently blurry images. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
2296634X
Database :
Complementary Index
Journal :
Frontiers in Cell & Developmental Biology
Publication Type :
Academic Journal
Accession number :
175691411
Full Text :
https://doi.org/10.3389/fcell.2024.1259037