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CyclicPepedia: a knowledge base of natural and synthetic cyclic peptides.

Authors :
Liu, Lei
Yang, Liu
Cao, Suqi
Gao, Zhigang
Yang, Bin
Zhang, Guoqing
Zhu, Ruixin
Wu, Dingfeng
Source :
Briefings in Bioinformatics; May2024, Vol. 25 Issue 3, p1-11, 11p
Publication Year :
2024

Abstract

Cyclic peptides offer a range of notable advantages, including potent antibacterial properties, high binding affinity and specificity to target molecules, and minimal toxicity, making them highly promising candidates for drug development. However, a comprehensive database that consolidates both synthetically derived and naturally occurring cyclic peptides is conspicuously absent. To address this void, we introduce CyclicPepedia (https://www.biosino.org/iMAC/cyclicpepedia/), a pioneering database that encompasses 8744 known cyclic peptides. This repository, structured as a composite knowledge network, offers a wealth of information encompassing various aspects of cyclic peptides, such as cyclic peptides' sources, categorizations, structural characteristics, pharmacokinetic profiles, physicochemical properties, patented drug applications, and a collection of crucial publications. Supported by a user-friendly knowledge retrieval system and calculation tools specifically designed for cyclic peptides, CyclicPepedia will be able to facilitate advancements in cyclic peptide drug development. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14675463
Volume :
25
Issue :
3
Database :
Complementary Index
Journal :
Briefings in Bioinformatics
Publication Type :
Academic Journal
Accession number :
177375815
Full Text :
https://doi.org/10.1093/bib/bbae190