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Genetic variants of m6A modification genes are associated with survival of HBV‐related hepatocellular carcinoma.

Authors :
Liu, Shuyan
Li, Jianxu
Qiu, Moqin
Liu, Yingchun
Wen, Qiuping
Lin, Qiuling
Jiang, Yanji
Zhou, Zihan
Liang, Xiumei
Wei, Xiaoxia
Yu, Hongping
Chen, Peiqin
Source :
Journal of Cellular & Molecular Medicine; Aug2024, Vol. 28 Issue 16, p1-11, 11p
Publication Year :
2024

Abstract

N6‐methyladenosine (m6A) is a dynamic and reversible modification process involving in a series of important biological and pathophysiological processes, including the progression of cancers. Herein, we aimed to assess the relationships of genetic variants in m6A modification genes with the survival of hepatitis B virus ‐related hepatocellular carcinoma (HBV‐HCC). We performed a two‐stage survival analysis to investigate the associations of 4425 single nucleotide polymorphisms (SNPs) in 36 m6A modification genes with the overall survival (OS) of HBV‐HCC patients. Then, the identified SNPs were further used to functionally annotate. We identified that METTL3 rs1263790 (A > G) and ADARB1 rs57884102 (C > T) were significantly associated with the HBV‐HCC OS (hazard ratios [HR] = 0.68, 95% confidence interval [CI] = 0.52–0.89, p = 0.004; and HR = 1.70, 95% CI = 1.33–2.18, p < 0.001, respectively). Combined analysis revealed that patients carrying more risk genotypes of two variants had a progressively poorer OS. Moreover, the expression quantitative trait loci (eQTL) analysis indicated that rs1263790 G allele decreased mRNA expression levels of METTL3 in 483 cell‐cultured fibroblasts samples. And we found the mRNA expression levels of METTL3 and ADARB1 in HCC tissues were higher than in normal tissues, and the higher METTL3 and the lower ADARB1 were associated with poorer HCC OS. Our results demonstrated that two novel genetic variants (METTL3 rs1263790 and ADARB1 rs57884102) may be potential prognostic markers for HBV‐HCC, but these results need larger different ethnic cohorts and functional experiments to validate in the future. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15821838
Volume :
28
Issue :
16
Database :
Complementary Index
Journal :
Journal of Cellular & Molecular Medicine
Publication Type :
Academic Journal
Accession number :
179374651
Full Text :
https://doi.org/10.1111/jcmm.18517