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Known pathogenic gene variants and new candidates detected in sudden unexpected infant death using whole genome sequencing.

Authors :
Bard, Angela M.
Clark, Lindsay V.
Cosgun, Erdal
Aldinger, Kimberly A.
Timms, Andrew
Quina, Lely A.
Ferres, Juan M. Lavista
Jardine, David
Haas, Elisabeth A.
Becker, Tatiana M.
Pagan, Chelsea M.
Santani, Avni
Martinez, Diego
Barua, Soumitra
McNutt, Zakkary
Nesbitt, Addie
Mitchell, Edwin A.
Ramirez, Jan‐Marino
Source :
American Journal of Medical Genetics. Part A; Nov2024, Vol. 194 Issue 11, p1-39, 39p
Publication Year :
2024

Abstract

The purpose of this study is to gain insights into potential genetic factors contributing to the infant's vulnerability to Sudden Unexpected Infant Death (SUID). Whole Genome Sequencing (WGS) was performed on 144 infants that succumbed to SUID, and 573 healthy adults. Variants were filtered by gnomAD allele frequencies and predictions of functional consequences. Variants of interest were identified in 88 genes, in 64.6% of our cohort. Seventy‐three of these have been previously associated with SIDS/SUID/SUDP. Forty‐three can be characterized as cardiac genes and are related to cardiomyopathies, arrhythmias, and other conditions. Variants in 22 genes were associated with neurologic functions. Variants were also found in 13 genes reported to be pathogenic for various systemic disorders and in two genes associated with immunological function. Variants in eight genes are implicated in the response to hypoxia and the regulation of reactive oxygen species (ROS) and have not been previously described in SIDS/SUID/SUDP. Seventy‐two infants met the triple risk hypothesis criteria. Our study confirms and further expands the list of genetic variants associated with SUID. The abundance of genes associated with heart disease and the discovery of variants associated with the redox metabolism have important mechanistic implications for the pathophysiology of SUID. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15524825
Volume :
194
Issue :
11
Database :
Complementary Index
Journal :
American Journal of Medical Genetics. Part A
Publication Type :
Academic Journal
Accession number :
180231920
Full Text :
https://doi.org/10.1002/ajmg.a.63596