Purification and characterization of agarases from a marine bacterium Vibrio sp . F-6.

Marine bacterium Vibrio sp. F-6, utilizing agarose as a carbon source to produce agarases, was isolated from seawater samples taken from Qingdao, China. Two agarases (AG-a and AG-b) were purified to a homogeneity from the cultural supernatant of Vibrio sp. F-6 through ammonium sulfate precipitation, Q-Sepharose FF chromatography, and Sephacryl S-100 gel filtration. Molecular weights of agarases were estimated to be 54.0 kDa (AG-a) and 34.5 kDa (AG-b) by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). The optimum pH values for AG-a and AG-b were about 7.0 and 9.0, respectively. AG-a was stable in the pH range of 4.0–9.0 and AG-b was stable in the pH range of 4.0–10.0. The optimum temperatures of AG-a and AG-b were 40 and 55 °C, respectively. AG-a was stable at temperature below 50 °C. AG-b was stable at temperature below 60 °C. Zn²⁺, Mg²⁺ or Ca²⁺ increased AG-a activity, while Mn²⁺, Cu²⁺ or Ca²⁺ increased AG-b activity. However, Ag⁺, Hg²⁺, Fe³⁺, EDTA and SDS inhibited AG-a and AG-b activities. The main hydrolysates of agarose by AG-a were neoagarotetraose and neoagarohexaose. The main hydrolysates of agarose by AG-b were neoagarooctaose and neoagarohexaose. When the mixture of AG-a and AG-b were used, agarose was mainly degraded into neoagarobiose. [ABSTRACT FROM AUTHOR]