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Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33.

Authors :
Houlston, Richard S.
Cheadle, Jeremy
Dobbins, Sara E.
Tenesa, Albert
Jones, Angela M.
Howarth, Kimberley
Spain, Sarah L.
Broderick, Peter
Domingo, Enric
Farrington, Susan
Prendergast, James G. D.
Pittman, Alan M.
Theodoratou, Evi
Smith, Christopher G.
Olver, Bianca
Walther, Axel
Barnetson, Rebecca A.
Churchman, Michael
Jaeger, Emma E. M.
Penegar, Steven
Source :
Nature Genetics; Nov2010, Vol. 42 Issue 11, p973-977, 5p, 1 Diagram, 2 Charts, 1 Graph
Publication Year :
2010

Abstract

Genome-wide association studies (GWAS) have identified ten loci harboring common variants that influence risk of developing colorectal cancer (CRC). To enhance the power to identify additional CRC risk loci, we conducted a meta-analysis of three GWAS from the UK which included a total of 3,334 affected individuals (cases) and 4,628 controls followed by multiple validation analyses including a total of 18,095 cases and 20,197 controls. We identified associations at four new CRC risk loci: 1q41 (rs6691170, odds ratio (OR) = 1.06, P = 9.55 × 10<superscript>−10</superscript> and rs6687758, OR = 1.09, P = 2.27 × 10<superscript>−9</superscript>), 3q26.2 (rs10936599, OR = 0.93, P = 3.39 × 10<superscript>−8</superscript>), 12q13.13 (rs11169552, OR = 0.92, P = 1.89 × 10<superscript>−10</superscript> and rs7136702, OR = 1.06, P = 4.02 × 10<superscript>−8</superscript>) and 20q13.33 (rs4925386, OR = 0.93, P = 1.89 × 10<superscript>−10</superscript>). In addition to identifying new CRC risk loci, this analysis provides evidence that additional CRC-associated variants of similar effect size remain to be discovered. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10614036
Volume :
42
Issue :
11
Database :
Complementary Index
Journal :
Nature Genetics
Publication Type :
Academic Journal
Accession number :
54654949
Full Text :
https://doi.org/10.1038/ng.670