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Quantifying local heterogeneity via morphologic scale: Distinguishing tumoral from stromal regions.

Authors :
Janowczyk, Andrew
Chandran, Sharat
Madabhushi, Anant
Source :
Journal of Pathology Informatics; Jul2013, Vol. 4 Issue 2, p45-54, 10p, 3 Color Photographs, 2 Diagrams, 4 Charts, 8 Graphs
Publication Year :
2013

Abstract

Introduction: The notion of local scale was introduced to characterize varying levels of image detail so that localized image processing tasks could be performed while simultaneously yielding a globally optimal result. In this paper, we have presented the methodological framework for a novel locally adaptive scale definition, morphologic scale (MS), which is different from extant local scale definitions in that it attempts to characterize local heterogeneity as opposed to local homogeneity. Methods: At every point of interest, the MS is determined as a series of radial paths extending outward in the direction of least resistance, navigating around obstructions. Each pixel can then be directly compared to other points of interest via a rotationally invariant quantitative feature descriptor, determined by the application of Fourier descriptors to the collection of these paths. Results: Our goal is to distinguish tumor and stromal tissue classes in the context of four different digitized pathology datasets: prostate tissue microarrays (TMAs) stained with hematoxylin and eosin (HE) (44 images) and TMAs stained with only hematoxylin (H) (44 images), slide mounts of ovarian H (60 images), and HE breast cancer (51 images) histology images. Classification performance over 50 cross validation runs using a Bayesian classifier produced mean areas under the curve of 0.88 ±0.01 (prostate HE), 0.87 ±0.02 (prostate H), 0.88 ±0.01 (ovarian H), and 0.80 ±0.01 (breast HE). Conclusion: For each dataset listed in Table 3, we randomly selected 100 points per image, and using the procedure described in Experiment 1, we attempted to separate them as belonging to stroma or epithelium. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
22295089
Volume :
4
Issue :
2
Database :
Complementary Index
Journal :
Journal of Pathology Informatics
Publication Type :
Academic Journal
Accession number :
94088011
Full Text :
https://doi.org/10.4103/2153-3539.109865