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Multi-species integrative biclustering

Authors :
Waltman, Peter
Kacmarczyk, Thadeous
Bate, Ashley
Kearns, Daniel
Reiss, David
Eichenberger, Patrick
Bonneau, Richard
Source :
Genome Biology; September 2010, Vol. 11 Issue: 9 pR96-R96, 1p
Publication Year :
2010

Abstract

We describe an algorithm, multi-species cMonkey, for the simultaneous biclustering of heterogeneous multiple-species data collections and apply the algorithm to a group of bacteria containing Bacillus subtilis, Bacillus anthracis, and Listeria monocytogenes. The algorithm reveals evolutionary insights into the surprisingly high degree of conservation of regulatory modules across these three species and allows data and insights from well-studied organisms to complement the analysis of related but less well studied organisms.

Details

Language :
English
ISSN :
14747596 and 1474760X
Volume :
11
Issue :
9
Database :
Supplemental Index
Journal :
Genome Biology
Publication Type :
Periodical
Accession number :
ejs22413609
Full Text :
https://doi.org/10.1186/gb-2010-11-9-r96