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The gold-standard genome of Aspergillus nigerNRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi

Authors :
Aguilar-Pontes, M.V.
Brandl, J.
McDonnell, E.
Strasser, K.
Nguyen, T.T.M.
Riley, R.
Mondo, S.
Salamov, A.
Nybo, J.L.
Vesth, T.C.
Grigoriev, I.V.
Andersen, M.R.
Tsang, A.
de Vries, R.P.
Source :
Studies In Mycology; September 2018, Vol. 91 Issue: 1 p61-78, 18p
Publication Year :
2018

Abstract

The fungal kingdom is too large to be discovered exclusively by classical genetics. The access to omics data opens a new opportunity to study the diversity within the fungal kingdom and how adaptation to new environments shapes fungal metabolism. Genomes are the foundation of modern science but their quality is crucial when analysing omics data. In this study, we demonstrate how one gold-standard genome can improve functional prediction across closely related species to be able to identify key enzymes, reactions and pathways with the focus on primary carbon metabolism.

Details

Language :
English
ISSN :
01660616 and 18729797
Volume :
91
Issue :
1
Database :
Supplemental Index
Journal :
Studies In Mycology
Publication Type :
Periodical
Accession number :
ejs46751644
Full Text :
https://doi.org/10.1016/j.simyco.2018.10.001