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CDetection: CRISPR-Cas12b-based DNA detection with sub-attomolar sensitivity and single-base specificity

Authors :
Teng, Fei
Guo, Lu
Cui, Tongtong
Wang, Xin-Ge
Xu, Kai
Gao, Qingqin
Zhou, Qi
Li, Wei
Source :
Genome Biology; December 2019, Vol. 20 Issue: 1 p1-7, 7p
Publication Year :
2019

Abstract

CRISPR-based nucleic acid detection methods are reported to facilitate rapid and sensitive DNA detection. However, precise DNA detection at the single-base resolution and its wide applications including high-fidelity SNP genotyping remain to be explored. Here we develop a Cas12b-mediated DNA detection (CDetection) strategy, which shows higher sensitivity on examined targets compared with the previously reported Cas12a-based detection platform. Moreover, we show that CDetection can distinguish differences at the single-base level upon combining the optimized tuned guide RNA (tgRNA). Therefore, our findings highlight the high sensitivity and accuracy of CDetection, which provides an efficient and highly practical platform for DNA detection.

Details

Language :
English
ISSN :
14747596 and 1474760X
Volume :
20
Issue :
1
Database :
Supplemental Index
Journal :
Genome Biology
Publication Type :
Periodical
Accession number :
ejs50459321
Full Text :
https://doi.org/10.1186/s13059-019-1742-z