Back to Search Start Over

GUI Implementation of VCDtools, A Program to Analyze Computed Vibrational Circular Dichroism Spectra

Authors :
Koenis, Mark A. J.
Visser, Olivier
Visscher, Lucas
Buma, Wybren J.
Nicu, Valentin P.
Source :
Journal of Chemical Information and Modeling; January 2020, Vol. 60 Issue: 1 p259-267, 9p
Publication Year :
2020

Abstract

As computing power increases, vibrational circular dichroism (VCD) calculations on molecules of larger sizes and complexities become possible. At the same time, the spectra resulting from these computations become increasingly more cumbersome to analyze. Here, we describe the GUI implementation into the Amsterdam Density Functional (ADF) software package of VCDtools, a toolbox that provides a user-friendly means to analyze VCD spectra. Key features are the use of the generalized coupled oscillator analysis methods, as well as an easy visualization of the atomic electric and magnetic transition dipole moments which together provide detailed insight in the origin of the VCD intensity. Using several prototypical examples we demonstrate the functionalities of the program. In particular, we show how the spectra can be analyzed to detect differences between theory and experiment arising from large-amplitude motions or incorrect molecular structures and, most importantly, how the program can be used to prevent incorrect enantiomeric assignments.

Details

Language :
English
ISSN :
15499596 and 1549960X
Volume :
60
Issue :
1
Database :
Supplemental Index
Journal :
Journal of Chemical Information and Modeling
Publication Type :
Periodical
Accession number :
ejs51725282
Full Text :
https://doi.org/10.1021/acs.jcim.9b00956