Acid-induced conformational switching of helical foldamers containing imidazole amide

N-Alkylated oligo- and poly(p-benzamide)s exist as dynamic helical structures with all-cis amide conformation. Imidazole N-alkylated amides also show cis conformational preference, but their major conformer is changed from cis to trans by addition of acid. Here, based on those findings, we designed and synthesized aromatic triamides 3and hexaamides 4containing an imidazole ring as candidate foldamers anticipated to exhibit acid-induced conformational change. X-ray structure analysis of oligomer 3cshowed that it takes all-cis conformation in the crystal. In solution, all the oligoamides examined existed as an equilibrium mixture of 4 conformers, among which the major conformer was the folded all-cis structure as judged from the low-temperature 1H NMR spectra. When trifluoroacetic acid-dwas added to a solution of the oligoamides in methylene chloride-d2, only 2 conformers were observed in the low-temperature 1H NMR spectra, and the major conformer was the (trans,cis) form with respect to the amide bonds of the imidazole at the 4 and 2 positions. Experimental and theoretical analysis of the CD spectra indicated that the conformation of hexaamides 4changes upon the addition of acid. Our results suggest that N-alkylated imidazole amide can serve as a key structural motif for the construction of foldamers with acid-switchable conformation.Graphical AbstractAromatic oligoamides bearing an imidazole ring existed mainly in the folded structure with all-cis-amide bonds in solution, while the addition of acid changed the main conformer of the oligomers to the structures with trans-amide bond at the 4 position of the imidazole ring. Thus, imidazole amide is a key structural motif for the construction of helical foldamers that exhibit conformational switching in response to acid.