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Genome-wide association analysis identifies TXNRD2, ATXN2 and FOXC1 as susceptibility loci for primary open-angle glaucoma

Authors :
Bailey, Jessica N Cooke
Loomis, Stephanie J
Kang, Jae H
Allingham, R Rand
Gharahkhani, Puya
Khor, Chiea Chuen
Burdon, Kathryn P
Aschard, Hugues
Chasman, Daniel I
Igo, Robert P
Hysi, Pirro G
Glastonbury, Craig A
Ashley-Koch, Allison
Brilliant, Murray
Brown, Andrew A
Budenz, Donald L
Buil, Alfonso
Cheng, Ching-Yu
Choi, Hyon
Christen, William G
Curhan, Gary
De Vivo, Immaculata
Fingert, John H
Foster, Paul J
Fuchs, Charles
Gaasterland, Douglas
Gaasterland, Terry
Hewitt, Alex W
Hu, Frank
Hunter, David J
Khawaja, Anthony P
Lee, Richard K
Li, Zheng
Lichter, Paul R
Mackey, David A
McGuffin, Peter
Mitchell, Paul
Moroi, Sayoko E
Perera, Shamira A
Pepper, Keating W
Qi, Qibin
Realini, Tony
Richards, Julia E
Ridker, Paul M
Rimm, Eric
Ritch, Robert
Ritchie, Marylyn
Schuman, Joel S
Scott, William K
Singh, Kuldev
Sit, Arthur J
Song, Yeunjoo E
Tamimi, Rulla M
Topouzis, Fotis
Viswanathan, Ananth C
Verma, Shefali Setia
Vollrath, Douglas
Wang, Jie Jin
Weisschuh, Nicole
Wissinger, Bernd
Wollstein, Gadi
Wong, Tien Y
Yaspan, Brian L
Zack, Donald J
Zhang, Kang
Study, Epic-Norfolk Eye
ANZRAG Consortium
Weinreb, Robert N
Pericak-Vance, Margaret A
Small, Kerrin
Hammond, Christopher J
Aung, Tin
Liu, Yutao
Vithana, Eranga N
MacGregor, Stuart
Craig, Jamie E
Kraft, Peter
Howell, Gareth
Hauser, Michael A
Pasquale, Louis R
Haines, Jonathan L
Wiggs, Janey L
Source :
Nature genetics, vol 48, iss 2
Publication Year :
2016
Publisher :
eScholarship, University of California, 2016.

Abstract

Primary open-angle glaucoma (POAG) is a leading cause of blindness worldwide. To identify new susceptibility loci, we performed meta-analysis on genome-wide association study (GWAS) results from eight independent studies from the United States (3,853 cases and 33,480 controls) and investigated the most significantly associated SNPs in two Australian studies (1,252 cases and 2,592 controls), three European studies (875 cases and 4,107 controls) and a Singaporean Chinese study (1,037 cases and 2,543 controls). A meta-analysis of the top SNPs identified three new associated loci: rs35934224[T] in TXNRD2 (odds ratio (OR) = 0.78, P = 4.05 × 10(-11)) encoding a mitochondrial protein required for redox homeostasis; rs7137828[T] in ATXN2 (OR = 1.17, P = 8.73 × 10(-10)); and rs2745572[A] upstream of FOXC1 (OR = 1.17, P = 1.76 × 10(-10)). Using RT-PCR and immunohistochemistry, we show TXNRD2 and ATXN2 expression in retinal ganglion cells and the optic nerve head. These results identify new pathways underlying POAG susceptibility and suggest new targets for preventative therapies.

Details

Database :
OpenAIRE
Journal :
Nature genetics, vol 48, iss 2
Accession number :
edsair.dedup.wf.001..16ad1ea602c8bb67abe9185adc05fcc4