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WeNMR: Structural biology on the grid
- Source :
- Scopus-Elsevier, Hyper Article en Ligne, Flore (Florence Research Repository), CORE (RIOXX-UK Aggregator), Mémoires en Sciences de l'Information et de la Communication, Datacite, NARCIS, ORCID, INRIA a CCSD electronic archive server, UnpayWall, Microsoft Academic Graph, ICT FP7 Publications Database, CORE, DANS (Data Archiving and Networked Services), JOURNAL OF GRID COMPUTING, 10(4), 743-767. Springer Netherlands, CEUR-WS Proceedings, 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, IWSG-Life, 2011, IWSG-Life, IWSG-Life 2011: Science Gateways for Life Sciences 2011, Journal of Grid Computing, Springer Verlag (Germany), 2012, 10 (4), pp.743-767, Terstyanszky Gabor ; Kiss Tamas. 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, Jun 2011, London, United Kingdom. 819, Terstyanszky Gabor ; Kiss Tamas. 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, Jun 2011, London, United Kingdom. 819, 2011, 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, Jun 2011, London, United Kingdom, Journal of Grid Computing, Springer Verlag, 2012, 10 (4), pp.743-767, Journal of Grid Computing
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Abstract
- International audience The WeNMR (http://www.wenmr.eu) project is a European Union funded international effort to streamline and automate analysis of Nuclear Magnetic Resonance (NMR) and Small Angle X-Ray scattering (SAXS) imaging data for atomic and near-atomic resolution molecular structures. Conventional calculation of structure requires the use of various software packages, considerable user expertise and ample computational resources. To facilitate the use of NMR spectroscopy and SAXS in life sciences the WeNMR consortium has established standard computational workflows and services through easy-to-use web interfaces, while still retaining sufficient flexibility to handle more specific requests. Thus far, a number of programs often used in structural biology have been made available through application portals. The implementation of these services, in particular the distribution of calculations to a Grid computing infrastructure, involves a novel mechanism for submission and handling of jobs that is independent of the type of job being run. With over 450 registered users (September 2012), WeNMR is currently the largest Virtual Organization (VO) in life sciences. With its large and worldwide user community, WeNMR has become the first Virtual Research Community officially recognized by the European Grid Infrastructure (EGI).
Details
- ISSN :
- 15729184 and 15707873
- Database :
- OpenAIRE
- Journal :
- Scopus-Elsevier, Hyper Article en Ligne, Flore (Florence Research Repository), CORE (RIOXX-UK Aggregator), Mémoires en Sciences de l'Information et de la Communication, Datacite, NARCIS, ORCID, INRIA a CCSD electronic archive server, UnpayWall, Microsoft Academic Graph, ICT FP7 Publications Database, CORE, DANS (Data Archiving and Networked Services), JOURNAL OF GRID COMPUTING, 10(4), 743-767. Springer Netherlands, CEUR-WS Proceedings, 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, IWSG-Life, 2011, IWSG-Life, IWSG-Life 2011: Science Gateways for Life Sciences 2011, Journal of Grid Computing, Springer Verlag (Germany), 2012, 10 (4), pp.743-767, Terstyanszky Gabor ; Kiss Tamas. 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, Jun 2011, London, United Kingdom. 819, Terstyanszky Gabor ; Kiss Tamas. 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, Jun 2011, London, United Kingdom. 819, 2011, 3rd International Workshop on Science Gateways for Life Sciences-IWSG-Life 2011, Jun 2011, London, United Kingdom, Journal of Grid Computing, Springer Verlag, 2012, 10 (4), pp.743-767, Journal of Grid Computing
- Accession number :
- edsair.dedup.wf.001..211cbd525e70cbc5819f1549b338e9e3