Back to Search Start Over

Fusarium: more than a node or a foot-shaped basal cell

Authors :
Crous, PW
Lombard, L
Sandoval-Denis, M
Seifert, KA
Schroers, H-J
Chaverri, P
Gené, J
Guarro, J
Hirooka, Y
Bensch, K
Kema, GHJ
Lamprecht, SC
Cai, L
Rossman, AY
Stadler, M
Summerbell, RC
Taylor, JW
Ploch, S
Visagie, CM
Yilmaz, N
Frisvad, JC
Abdel-Azeem, AM
Abdollahzadeh, J
Abdolrasouli, A
Akulov, A
Alberts, JF
Araújo, JPM
Ariyawansa, HA
Bakhshi, M
Bendiksby, M
Ben Hadj Amor, A
Bezerra, JDP
Boekhout, T
Câmara, MPS
Carbia, M
Cardinali, G
Castañeda-Ruiz, RF
Celis, A
Chaturvedi, V
Collemare, J
Croll, D
Damm, U
Decock, CA
de Vries, RP
Ezekiel, CN
Fan, XL
Fernández, NB
Gaya, E
González, CD
Gramaje, D
Groenewald, JZ
Grube, M
Guevara-Suarez, M
Gupta, VK
Guarnaccia, V
Haddaji, A
Hagen, F
Haelewaters, D
Hansen, K
Hashimoto, A
Hernández-Restrepo, M
Houbraken, J
Hubka, V
Hyde, KD
Iturriaga, T
Jeewon, R
Johnston, PR
Jurjević, Ž
Karalti, I
Korsten, L
Kuramae, EE
Kušan, I
Labuda, R
Lawrence, DP
Lee, HB
Lechat, C
Li, HY
Litovka, YA
Maharachchikumbura, SSN
Marin-Felix, Y
Matio Kemkuignou, B
Matočec, N
McTaggart, AR
Mlčoch, P
Mugnai, L
Nakashima, C
Nilsson, RH
Noumeur, SR
Pavlov, IN
Peralta, MP
Phillips, AJL
Pitt, JI
Polizzi, G
Quaedvlieg, W
Rajeshkumar, KC
Restrepo, S
Rhaiem, A
Robert, J
Robert, V
Rodrigues, AM
Source :
Studies in mycology, vol 98, iss 98
Publication Year :
2021
Publisher :
eScholarship, University of California, 2021.

Abstract

Recent publications have argued that there are potentially serious consequences for researchers in recognising distinct genera in the terminal fusarioid clade of the family Nectriaceae. Thus, an alternate hypothesis, namely a very broad concept of the genus Fusarium was proposed. In doing so, however, a significant body of data that supports distinct genera in Nectriaceae based on morphology, biology, and phylogeny is disregarded. A DNA phylogeny based on 19 orthologous protein-coding genes was presented to support a very broad concept of Fusarium at the F1 node in Nectriaceae. Here, we demonstrate that re-analyses of this dataset show that all 19 genes support the F3 node that represents Fusarium sensu stricto as defined by F.sambucinum (sexual morph synonym Gibberella pulicaris). The backbone of the phylogeny is resolved by the concatenated alignment, but only six of the 19 genes fully support the F1 node, representing the broad circumscription of Fusarium. Furthermore, a re-analysis of the concatenated dataset revealed alternate topologies in different phylogenetic algorithms, highlighting the deep divergence and unresolved placement of various Nectriaceae lineages proposed as members of Fusarium. Species of Fusarium s. str. are characterised by Gibberella sexual morphs, asexual morphs with thin- or thick-walled macroconidia that have variously shaped apical and basal cells, and trichothecene mycotoxin production, which separates them from other fusarioid genera. Here we show that the Wollenweber concept of Fusarium presently accounts for 20 segregate genera with clear-cut synapomorphic traits, and that fusarioid macroconidia represent a character that has been gained or lost multiple times throughout Nectriaceae. Thus, the very broad circumscription of Fusarium is blurry and without apparent synapomorphies, and does not include all genera with fusarium-like macroconidia, which are spread throughout Nectriaceae (e.g., Cosmosporella, Macroconia, Microcera). In this study four new genera are introduced, along with 18 new species and 16 new combinations. These names convey information about relationships, morphology, and ecological preference that would otherwise be lost in a broader definition of Fusarium. To assist users to correctly identify fusarioid genera and species, we introduce a new online identification database, Fusarioid-ID, accessible at www.fusarium.org. The database comprises partial sequences from multiple genes commonly used to identify fusarioid taxa (act1, CaM, his3, rpb1, rpb2, tef1, tub2, ITS, and LSU). In this paper, we also present a nomenclator of names that have been introduced in Fusarium up to January 2021 as well as their current status, types, and diagnostic DNA barcode data. In this study, researchers from 46 countries, representing taxonomists, plant pathologists, medical mycologists, quarantine officials, regulatory agencies, and students, strongly support the application and use of a more precisely delimited Fusarium (= Gibberella) concept to accommodate taxa from the robust monophyletic node F3 on the basis of a well-defined and unique combination of morphological and biochemical features. This F3 node includes, among others, species of the F.fujikuroi, F. incarnatum-equiseti, F. oxysporum, and F.sambucinum species complexes, but not species of Bisifusarium [F.dimerum species complex (SC)], Cyanonectria (F.buxicola SC), Geejayessia (F.staphyleae SC), Neocosmospora (F.solani SC) or Rectifusarium (F.ventricosum SC). The present study represents the first step to generating a new online monograph of Fusarium and allied fusarioid genera (www.fusarium.org).

Subjects

Subjects :
Fusarium cromyophthoron Sideris
Scolecofusarium L. Lombard
Fusarium werrikimbe J.L. Walsh
Stylonectria hetmanica Akulov
Sangal
Fusarium rubiginosum Appel & Wollenw
Fusisporium hordei Wm.G. Sm
Fusarium arthrosporioides Sherb
Mycology & Parasitology
Fusarium echinatum Sand.-Den. & G.J. Marais
Fusisporium didymum Harting
L. Lombard
Apiognomonia platani (Lév.) L. Lombard
Fusarium oxysporum var. asclerotium Sherb
Fusarium aridum O.A. Pratt
Neocosmospora obliquiseptata (T. Aoki et al.) L. Lombard & Sand.-Den
Macroconia phlogioides Sand.-Den. & Crous
Neocosmospora neerlandica Crous & Sand.-Den
Fusarium tuberivorum Wilcox & G.K. Link
Selenosporium equiseti Corda
Fusarium eucheliae Sartory
Fusarium clavatum Sherb
Fusarium poolense Taubenh
Fusarium tritici Liebman
Fusisporium elasticae Thüm
Fusarium arcuatum Berk. & M.A. Curtis
Fusarium sublunatum Reinking
Crous & Sand.-Den
Fusarium cactacearum Pasin. & Buzz.-Trav
Fusarium pusillum Wollenw
Fusarium viticola Thüm
Fusisporium episphaericum Cooke & Ellis
Fusarium willkommii Lindau
Fusarium idahoanum O.A. Pratt
Fusarium lyarnte J.L. Walsh
Neocosmospora tuaranensis (T. Aoki et al.) L. Lombard & Sand.-Den
Selenosporium hippocastani Corda
Fusarium biforme Sherb
Fusarium malvacearum Taubenh
Gibberella phyllostachydicola W. Yamam
Schroers & Rossman
Fusarium muentzii Delacr
Fusisporium pandani Corda
Fusarium genevense Dasz
R. Sartory & J. Mey
Neocosmospora pseudopisi Sand.-Den. & L. Lombard
Fusarium cucurbitae Taubenh
Fusarium caudatum Wollenw
Fusarium epicoccum McAlpine
Luteonectria nematophila (Nirenberg & Hagedorn) Sand.-Den. & L. Lombard
Atractium ciliatum Link
Neocosmospora nelsonii Crous & Sand.-Den
Hymenella aurea (Corda) L. Lombard
Fusicolla quarantenae J.D.P. Bezerra
Setofusarium setosum (Samuels & Nirenberg) Sand.-Den. & Crous
Calloria tremelloides (Grev.) L. Lombard
Fusarium prunorum McAlpine
Microbiology
Sand.-Den
Fusarium heterosporum Nees & T. Nees
Luteonectria Sand.-Den
Sand.-Den. & Crous
Sphaeria sanguinea var. cicatricum Berk
Cephalosporium sacchari E.J. Butler
Fusarium aeruginosum Delacr
Fusarium amentorum Lacroix
Fusarium tabacivorum Delacr
Fusarium graminearum Schwabe
Fusarium xylarioides Steyaert
Fusarium redolens Wollenw
Fusarium stercoris Fuckel
Fusarium ustilaginis Kellerm. & Swingle
Fusarium polymorphum Matr
Fusarium armeniacum (G.A. Forbes et al.) L.W. Burgess & Summerell
Fusisporium culmorum Wm.G. Sm
Mycotoxins
Nothofusarium Crous
Fusarium cesatii Rabenh
Fusarium cavispermum Corda
Fusisporium lolii Wm.G. Sm
Fusisporium avenaceum Fr
Neocosmospora merkxiana Quaedvl. & Sand.-Den
Neocosmospora
Fusarium graminum Corda
Fusarium scirpi Lambotte & Fautrey
Sporotrichum poae Peck
Fusarium aleyrodis Petch
Fusisporium arundinis Corda
Fusarium cuneiforme Sherb
Fusicolla meniscoidea L. Lombard & Sand.-Den
Fusarium putrefaciens Osterw
Atractium pallidum Bonord
Fusisporium anthophilum A. Braun
Macroconia bulbipes Crous & Sand.-Den
Fusarium coccinellum Kalchbr
Fusicolla sporellula Sand.-Den. & L. Lombard
Fusisporium andropogonis Cooke ex Thüm
Fusarium asparagi Delacr
Fusarium martii f. phaseoli Burkh
Fusarium rubrum Parav
Fusarium heterosporioides Fautrey
Fusarium reticulatum Mont
Fusarium zygopetali Delacr
Fusarium rhizophilum Corda
Fusarium loncheceras Sideris
Cosmosporella cavisperma (Corda) Sand.-Den
Stylonectria corniculata Gräfenhan
Fusarium fissum Peyl
Fusarium flocciferum Corda
Fusarium tumidum var. humi Reinking
Fusarium prieskaense G.J. Marais & Sand.-Den
Fusarium succisae Schröt. ex Sacc
Selenosporium sarcochroum Desm
Fusarium rhizochromatistes Sideris
Fusarium rhodellum McAlpine
Fusisporium incarnatum Roberge ex Desm
Selenosporium urticearum Corda
Fusarium secalis Jacz
Luteonectria albida (Rossman) Sand.-Den. & L. Lombard
Fusarium lateritium Nees
Fusarium roesleri Thüm
Crous & Souza-Motta
Fusarium citriforme Jamal
Menispora penicillata Harz
Fusisporium flavidum Bonord
Fusarium cepae Hanzawa
Fusarium palczewskii Jacz
Fusarium samoense Gehrm
Fusarium nigrum O.A. Pratt
Fusarium cacti-maxonii Pasin. & Buzz.-Trav
Fusarium citrinum Wollenw
Fusarium dimerum var. nectrioides Wollenw
Neocosmospora rekana (Lynn & Marinc.) L. Lombard & Sand.-Den
Setofusarium (Nirenberg & Samuels) Crous & Sand.-Den
E.C.Y. Liew & Summerell
Neocosmospora floridana (T. Aoki et al.) L. Lombard & Sand.-Den
Fusarium gemmiperda Aderh
Fusarium albidoviolaceum Dasz
Nectriaceae
Fusarium juruanum Henn
Multi-gene phylogeny
Neocosmospora epipeda Quaedvl. & Sand.-Den
Novel taxa
Hymenella spermogoniopsis (Jul. Müll.) L. Lombard & Sand.-Den
Fusarium spinaciae Hungerf
Fusarium longipes Wollenw. & Reinking
L.W. Burgess
Fusarium agaricorum Sarrazin
Fusarium stillatum De Not. ex Sacc
Fusisporium clypeaster Corda
E.C.Y. Liew & B.A. Summerell
Taxonomy
Fusarium palustre W.H. Elmer & Marra
Fusarium trichothecioides Wollenw
Pathogen
L. Lombard & Crous
Fusarium batatas Wollenw
Sand.-Den. & L. Lombard
Fusarium buharicum Jacz. ex Babajan & Teterevn.-Babajan
Dialonectria volutella (Ellis & Everh.) L. Lombard & Sand.-Den
Cylindrodendrum orthosporum (Sacc. & P. Syd.) L. Lombard
Fusarium sporotrichioides Sherb
Fusarium citrulli Taubenh
Nothofusarium devonianum L. Lombard
Fusarium stilboides Wollenw
Scolecofusarium ciliatum (Link) L. Lombard
Fusarium lanceolatum O.A. Pratt
Fusarium rostratum Appel & Wollenw
Fusarium annuum Leonian
Fusarium delacroixii Sacc

Details

Database :
OpenAIRE
Journal :
Studies in mycology, vol 98, iss 98
Accession number :
edsair.dedup.wf.001..3d77acee6163c60ef2fe7767f0d9bf9f