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Genetic risk, lifestyle, and AMD in Europe. The EYE-RISK consortium

Authors :
Colijn, Johanna Maria
Meester, Magda
Verzijden, T.
de Breuk, A.
SILVA, R.
Merle, Bénédicte M. J.
Cougnard-Grégoire, Audrey
Hoyng, Carel B.
Fauser, Sascha
Coolen, T.
Creuzot-Garcher, Catherine
Hense, H.W.
UEFFING, M.
Delcourt, Cécile
den Hollander, Anneke I.
Klaver, Caroline C. W.
EYE-RISK consortium, .
Erasmus University Medical Center [Rotterdam] (Erasmus MC)
Radboud University Medical Center [Nijmegen]
Coimbra Institute for Clinical and Biomedical Research [Coimbra, Portugal] (iCBR - Faculty of Medicine)
University of Coimbra [Portugal] (UC)
Bordeaux population health (BPH)
Université de Bordeaux (UB)-Institut de Santé Publique, d'Épidémiologie et de Développement (ISPED)-Institut National de la Santé et de la Recherche Médicale (INSERM)
University Hospital of Cologne [Cologne]
King‘s College London
Service d'Ophtalmologie (CHU de Dijon)
Centre Hospitalier Universitaire de Dijon - Hôpital François Mitterrand (CHU Dijon)
Centre des Sciences du Goût et de l'Alimentation [Dijon] (CSGA)
Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
University of Muenster
University of Tübingen
European Commission (grant number 634479) + Erasmus Medical Center + Rotterdam Eye Hospital through the CORR (Combined Ophthalmic Research Rotterdam) Foundation + Uitzicht (grant number 2015-36).
Julien, Sabine
Source :
BMC Ophthalmology, BMC Ophthalmology, BioMed Central, 2021, 128 (7), pp.1039-1049. ⟨10.1016/j.ophtha.2020.11.024⟩, BMC Ophthalmology, 2021, 128 (7), pp.1039-1049. ⟨10.1016/j.ophtha.2020.11.024⟩
Publication Year :
2021
Publisher :
HAL CCSD, 2021.

Abstract

International audience; PURPOSE: Age-related macular degeneration(AMD) is a common multifactorial disease in elderly with a prominent genetic basis. Many risk variants have been identified, but the interpretation is still challenging. We investigated the genetic distribution of AMD-associated risk variants in a large European consortium, calculated attributable, and pathway-specific genetic risks, and assessed the influence of lifestyle on genetic outcomes. DESIGN: Pooled analysis of cross-sectional data from the E3 consortium. PARTICIPANTS: 17.174 individuals aged 45+ participating in 6 population-based cohort studies, 2 clinic based studies, 1 case-control study. METHODS: AMD was diagnosed and graded based on fundus photographs. Data on genetics, lifestyle, and diet were harmonized and completed where necessary. Minor allele frequencies and population attributable fraction (PAF) were calculated per single nucleotide polymorphism (SNP). A total genetic risk score (GRS) and pathway-specific risk scores (complement, lipid, extra-cellular matrix, other) were constructed based on the dosage of SNPs and conditional beta's; a lifestyle score was constructed based on smoking and dietary intake. RESULTS: The risk variants with the largest difference between late AMD cases and controls, and the highest PAFs were located in ARMS2 (rs3750846) and CHF (rs570618 and rs10922109). Both risk increasing and protective variants had the highest PAFs. Combining all genetic variants, the total genetic risk score ranged from -3.50 to 4.63, was normally distributed and increased with AMD severity. Of the late AMD cases, 1581/1777 (89%) had a positive total GRS. The complement pathway and ARMS2 were by far the most prominent genetic pathways contributing to late AMD (positive GRS 90% of late cases), but risk in three pathways was most frequent (35% of late cases). Lifestyle was a strong determinant of the outcome in each genetic risk category; unfavorable lifestyle increased the risk of late AMD at least twofold. CONCLUSIONS: Genetic risk variants contribute to late AMD in the majority of cases. However, lifestyle factors have a strong influence on the outcome of genetic risk, and should be a strong focus in patient management. Genetic risks in ARMS2 and the complement pathway are present in the majority of late AMD, but are mostly combined with risks in other pathways.

Details

Language :
English
ISSN :
14712415
Database :
OpenAIRE
Journal :
BMC Ophthalmology, BMC Ophthalmology, BioMed Central, 2021, 128 (7), pp.1039-1049. ⟨10.1016/j.ophtha.2020.11.024⟩, BMC Ophthalmology, 2021, 128 (7), pp.1039-1049. ⟨10.1016/j.ophtha.2020.11.024⟩
Accession number :
edsair.dedup.wf.001..a721fa9b839520e1a4ca4ffc15058362