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A preliminary analysis of phylogenetic relationships ofArundinaria and related genera based on nucleotide sequences of nrDNA (ITS region) and cpDNA (trnL-F intergenic spacer)

Authors :
Xu Chen
Wang MingXiu
Ding YuLong
Zhuge Qiang
Huang Minren
Zou Hui-Yu
Source :
Journal of Forestry Research. 16:5-8
Publication Year :
2005
Publisher :
Springer Science and Business Media LLC, 2005.

Abstract

Phylogenetic relationships ofArundinaria and related genera (Pleioblastus, Pseudosasa, Oligostachyum, Bashania, Clavinodum, etc.) were assessed by analyzing the sequences of the nrDNA internal transcribed spacer (ITS) and the cpDNAtrnL-F intergenic spacer (IGS). Comparison withtrnL-F IGS sequence, the ITS region provided the higher number of parsimony informative characters, and the interspecific variation of the ITS sequence was higher than that of thetrnL-FIGS sequence. The tree obtained by combining both sets of data showed that the species sampled inArundinaria and the related genera were monophyletic and divided into two clades. The relationships and positioning of all the taxa surveryed (includingA. oleosa, A. hsienchuensis, A. chino, A. amara, A. yixingensis, A. amabilis, A. fortunei, A. pygmaea, A. gramineus, A. fargesii, A. faberi, A. hupehense, Pseudosasa japonica cv. Tsutsumiana, P. japonica andBrachystachyum densiflorum) were also discussed. The results from the sequences were broadly consistent with morphological characters, appearing all these taxa sampled belong to the genus ofArundinaria. The topologies of the trees generated from individual data and the combined data were similar.

Details

ISSN :
19930607 and 1007662X
Volume :
16
Database :
OpenAIRE
Journal :
Journal of Forestry Research
Accession number :
edsair.doi...........09c586f4500331803e4edaf7119fb76d
Full Text :
https://doi.org/10.1007/bf02856844