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Identification of Cambodian Gnetum (Gnetaceae, Gnetales) species by DNA barcoding
- Source :
- Korean Journal of Plant Taxonomy. 46:163-174
- Publication Year :
- 2016
- Publisher :
- The Korean Society of Plant Taxonomists, 2016.
-
Abstract
- Gnetum (Gnetaceae, Gnetales) is a gymnosperm genus with ca. 35 species distributed in tropical forests around the world. Due to its dioecious habit and lack of diagnostic characters from vegetative tissue, the identification of Gnetum species is not easy without seeds or reproductive structures. To identify and verify their phylogenetic positions, we applied DNA barcoding to Cambodian Gnetum collections gathered between 2010 and 2015, with previously designed cp matK gene primers. We newly sequenced partial matK sequences from 72 Gnetum collections, 43 out of 72 from Cambodia, and analyzed 115 Gnetum accessions using the neighbor-joining method. The resulting neighbor-joining tree categorized Cambodian Gnetum samples into three clades of species: G. macrostachyum, G. montanum, and G. aff. gracilipes. The recognition of G. aff. gracilipes in Cambodia is reported here for the first time. Taxonomic information for the three recognized Cambodian Gnetum species is provided and the benefits of the taxonomic reevaluation assisted by DNA barcoding are emphasized in this work.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Gnetum
biology
Phylogenetic tree
Plant Science
biology.organism_classification
010603 evolutionary biology
01 natural sciences
DNA barcoding
03 medical and health sciences
030104 developmental biology
Gymnosperm
Genus
Botany
Identification (biology)
Clade
Ecology, Evolution, Behavior and Systematics
Phylogenetic relationship
Subjects
Details
- ISSN :
- 24661546 and 12258318
- Volume :
- 46
- Database :
- OpenAIRE
- Journal :
- Korean Journal of Plant Taxonomy
- Accession number :
- edsair.doi...........53e95a32ebf3cba1835df7887b7d8ada