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The effects of sample size on omics study: from the perspective of robustness and diagnostic accuracy

Authors :
Xiaoyu Zhang
Feng Zhu
Xuejiao Cui
Source :
IOP Conference Series: Earth and Environmental Science. 252:022127
Publication Year :
2019
Publisher :
IOP Publishing, 2019.

Abstract

In the design of a specific omics study, sample size is an essential consideration that represents the balance among investigation ability, financial requirements and ethical issues. And it was reported critical to increase robustness and diagnostic accuracy. In this study, two metabolomics datasets were used to conduct analysis to understand the effects of sample size on omics study and strengthen the importance of it. Overlap and AUC were applied to measure the robustness and diagnostic accuracy respectively. The results showed the positive correlation between sample size and robustness, sample size and diagnostic accuracy. Moreover, the effects of sample size vary in datasets and indexes. So, for a specific dataset, sample size should be determined according to its purpose.

Details

ISSN :
17551315
Volume :
252
Database :
OpenAIRE
Journal :
IOP Conference Series: Earth and Environmental Science
Accession number :
edsair.doi...........564276074726487b660ab5da36edc547
Full Text :
https://doi.org/10.1088/1755-1315/252/2/022127