Additional file 3: Figure S2. of Extreme MHC class I diversity in the sedge warbler (Acrocephalus schoenobaenus); selection patterns and allelic divergence suggest that different genes have different functions

Alignment of sedge warbler MHC class I amino acid sequences, covering the α1, α2 and α3 regions (species-specific nomenclature and GenBank accession numbers are used, Acsc-UA), in comparison with great reed warblers (Acar cN3, AJ 005503), white-throated sparrows Zonotrichia albicollis (XM005497294), Atlantic canaries Serinus canaria (XM009100025), golden-collared Manakins Manacus vitellinus (XM008930636), medium ground-finches Geospiza fortis (xm014311325), zebra finches Taeniopygia guttata (XM002186531), hooded crows Corvus cornix cornix (XM010392747), numbered according to full-length chicken MHC class I. Identity with sequence Acar cN3 is indicated with dots, codons corresponding to the PBR with (P). (PDF 189 kb)