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UTILIZATION OD DIFFERENT MARKERS FOR HEDERA HELIX, L. GERMPLASM EVALUATION
- Source :
- Journal of microbiology, biotechnology and food sciences. 5:23-26
- Publication Year :
- 2016
- Publisher :
- Slovak University of Agriculture in Nitra, 2016.
-
Abstract
- Hedera helix is a plant that is valued for its medicinal properties and on the other hand criticized for its invading potential. Beside its medicinal use, a wide utilization as decorative plant is typical for this specie. Up-to date only a few molecular data are available for Hedera helix genome, thus the aim of the study was to evaluate the utilization of different DNA markers for the its further population studies purposes. In total, eight different DNA marker techniques were used for the PCR analysis – iPBS, BARE1 IRAP, Cassandra IRAP, Tst1 IRAP, HACRE 1 IRAP, RAPD, ISSR and miRNA. In total, 38 different iPBS primers were tested with the best results for primers 2152, 2270, 2079, 1899 and 2033. In the case of RAPD primers, all of them worked in the PCR excellent. For ISSR, only a 42 % of the used primers provided results that vere evaluated as very good or excellent ISSR profile. The most successful results were obtained by microsatelite repetitions (GA)8T, (CTG)3GC and (TG)10. A novel type of DNA markers – miRNA provided results that are promising for Hedera helix, L. population studies for their further utilization.
- Subjects :
- 0106 biological sciences
Genetics
Germplasm
04 agricultural and veterinary sciences
Biology
biology.organism_classification
01 natural sciences
Microbiology
Genetic analysis
Genome
RAPD
Hedera helix
Genetic marker
040103 agronomy & agriculture
0401 agriculture, forestry, and fisheries
Microsatellite
Molecular Biology
Gene
010606 plant biology & botany
Food Science
Biotechnology
Subjects
Details
- ISSN :
- 13385178
- Volume :
- 5
- Database :
- OpenAIRE
- Journal :
- Journal of microbiology, biotechnology and food sciences
- Accession number :
- edsair.doi...........84a50ee239704d942bc5f100f0eb96ea
- Full Text :
- https://doi.org/10.15414/jmbfs.2016.5.special1.23-26