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Nocardia bovistercoris sp. nov., an actinobacterium isolated from cow dung

Authors :
Lida Zhang
Xiangjing Wang
Jing Zhang
Xiaoyan Yu
Yanjie Jiao
Xue Zhang
Hanxun Ju
Junwei Zhao
Wensheng Xiang
Source :
International Journal of Systematic and Evolutionary Microbiology. 71
Publication Year :
2019
Publisher :
Microbiology Society, 2019.

Abstract

A novel actinobacterium, designated strain NEAU-351T, was isolated from cow dung collected from Shangzhi, Heilongjiang Province, northeast PR China and characterized using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NEAU-351T belonged to the genus Nocardia , with the highest similarity (98.96 %) to Nocardia takedensis DSM 44801T and less than 98.0 % identity with other type strains of the genus Nocardia . The polar lipids consisted of diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol. The major menaquinone was observed to contain MK-8(H4, ω-cycl) (78.2 %). The fatty acid profile mainly consisted of C16 : 0, C18 : 1 ω9c and 10-methyl C18 : 0. Mycolic acids were present. The genomic DNA G+C content of strain NEAU-351T was 68.1 mol%. In addition, the average nucleotide identity values between strain NEAU-351T and its reference strains, Nocardia takedensis DSM 44801T and Nocardia arizonensis NBRC 108935T, were found to be 81.4 and 82.9 %, respectively, and the level of digital DNA–DNA hybridization between them were 24.8 % (22.5–27.3 %) and 26.3 % (24–28.8 %), respectively. Here we report on the taxonomic characterization and classification of the isolate and propose that strain NEAU-351T represents a new species of the genus Nocardia , for which the name Nocardia bovistercoris is proposed. The type strain is NEAU-351T (=CCTCC AA 2019090T=DSM 110681T).

Details

ISSN :
14665034 and 14665026
Volume :
71
Database :
OpenAIRE
Journal :
International Journal of Systematic and Evolutionary Microbiology
Accession number :
edsair.doi...........a107dabc35fa5354a687f01ba816be77
Full Text :
https://doi.org/10.1099/ijsem.0.004699