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Gene selection for cancer classification using improved group lasso
- Source :
- 2016 Chinese Control and Decision Conference (CCDC).
- Publication Year :
- 2016
- Publisher :
- IEEE, 2016.
-
Abstract
- An improved group lasso is proposed for simultaneous cancer classification and gene selection. A new criterion is firstly proposed to evaluate the individual gene importance by using the conditional mutual information. Then the weights with biological explanation are constructed and the improved group lasso is presented. A blockwise descent algorithm for solving the proposed model is also developed. The experimental results on lung cancer and prostate cancer data sets demonstrate that the proposed method can effectively perform classification and gene selection.
- Subjects :
- 0301 basic medicine
business.industry
Quantitative Biology::Tissues and Organs
Conditional mutual information
Physics::Medical Physics
Pattern recognition
Mutual information
Machine learning
computer.software_genre
01 natural sciences
Group lasso
Electronic mail
010104 statistics & probability
03 medical and health sciences
030104 developmental biology
Gene selection
Entropy (information theory)
Artificial intelligence
0101 mathematics
business
computer
Random variable
Mathematics
Sparse matrix
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- 2016 Chinese Control and Decision Conference (CCDC)
- Accession number :
- edsair.doi...........aafc05204915db26bd12f1e87a7a0806