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The complete mitochondrial genome sequence and phylogenetic analysis of white-lipped deer (Cervus albirostris)

Authors :
Yongfang Yao
Guangxiang Zhu
Anxiang Wen
Pu Zhao
Huaming Xu
Huailiang Xu
Qingyong Ni
Meng Xie
Diyan Li
Tao He
Mingwang Zhang
Jiayun Wu
Qin Wang
Source :
Conservation Genetics Resources. 10:741-745
Publication Year :
2017
Publisher :
Springer Science and Business Media LLC, 2017.

Abstract

The white-lipped deer (Cervus albirostris) is a rare and endangered species endemic to the Qinghai–Tibet Plateau in China. In this study, we determined the complete mitochondrial genome sequence of the white-lipped deer. The total length of the mitogenome is 16473 bp. It has the typical structure of a vertebrate mitochondrial genome including 13 protein-coding genes(PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes and a control region (D-loop). tRNASer lacks the stem of the dihydrouridine (DHU) arm and fails to form a typical cloverleaf secondary structure. A phylogenetic tree based on the 13 PCG sequences of nine species closely related to white-lipped deer shows the classification status of the species within the family Cervidae. These results provide new molecular biology information to further understand the diversity of the white-lipped deer, which will help to protect this population.

Details

ISSN :
18777260 and 18777252
Volume :
10
Database :
OpenAIRE
Journal :
Conservation Genetics Resources
Accession number :
edsair.doi...........b8f1cc940278824bb519657895961d3e