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Primer design for identifying economically important <scp>L</scp> iriomyza species ( <scp>D</scp> iptera: <scp>A</scp> gromyzidae) by multiplex <scp>PCR</scp>

Authors :
Kazuhiko Konishi
Shigeo Nakamura
Takuhiro Yamaguchi
Atsushi Mochizuki
Susumu Tokumaru
Keiichiro Ueno
Toshio Masuda
Source :
Molecular Ecology Resources. 13:96-102
Publication Year :
2012
Publisher :
Wiley, 2012.

Abstract

Leafminer flies, especially, Liriomyza huidobrensis, Liriomyza sativae and Liriomyza trifolii, are quarantine species in many countries. Their morphological similarity makes identification difficult. To develop a rapid, reliable, sensitive and simple molecular identification method using multiplex PCR, we newly sequenced the mitochondrial cytochrome oxidase I (COI) genes of Liriomyza bryoniae, Liriomyza chinensis, L. huidobrensis, L. sativae, L. trifolii, Chromatomyia horticola and four parasitoid species. We aligned them with all the COI sequences of the leafminer flies found in the international DNA nucleotide sequence databases (DDBJ/EMBL/GenBank). We then designed species-specific primers to allow us to differentiate between L. bryoniae, L. chinensis, L. huidobrensis, L. sativae, and L. trifolii.

Details

ISSN :
17550998 and 1755098X
Volume :
13
Database :
OpenAIRE
Journal :
Molecular Ecology Resources
Accession number :
edsair.doi...........bf1cb38598e1e26939f921d3c7470420
Full Text :
https://doi.org/10.1111/1755-0998.12025