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On Quantum Chemistry Code Adaptation for RSC PetaStream Architecture

Authors :
Maria G. Khrenova
Alexander Moskovsky
Vladimir Mironov
Source :
Lecture Notes in Computer Science ISBN: 9783319201184
Publication Year :
2015
Publisher :
Springer International Publishing, 2015.

Abstract

Molecular simulations with quantum chemistry methods consume a large portion of CPU cycles in modern high-performance computing centers. Evolution of modern processors and HPC architectures necessitates adaptation of software to new hardware generations. The present work concentrates on the optimization of the widely used GAMESS code to Intel Xeon Phi architecture and recently devised RSC PetaStream platform. Since improvement in parallelization is required, the most frequently used Hartree-Fock and DFT methods are explored for additional parallelization options. The Xeon Phi requires vectorization that is important for electron-repulsion integrals (ERI) calculations to achieve good performance.

Details

ISBN :
978-3-319-20118-4
ISBNs :
9783319201184
Database :
OpenAIRE
Journal :
Lecture Notes in Computer Science ISBN: 9783319201184
Accession number :
edsair.doi...........e85a4d45f4c5f275dbc5a4359934eab4