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Function and wide distribution of DMSOP cleaving enzymes in marine organisms

Authors :
Ornella Carrion
Chun-Yang Li
Ming Peng
Jinyan Wang
Georg Pohnert
Muhaiminatul Azizah
Xiao-Yu Zhu
Andrew Curson
Keanu Walsham
Xiaohua Zhang
Serena Monaco
James Harvey
Qing Wang
Xiu-Lan Chen
Chao Gao
Ning Wang
Xiu-Juan Wang
Peng Wang
Stephen Giovannoni
Chih-Ping Lee
Christopher Suffridge
Yu Zhang
Ziqi Luo
Dazhi Wang
Jonathan Todd
Yuzhong Zhang
Publication Year :
2023
Publisher :
Research Square Platform LLC, 2023.

Abstract

Dimethylsulfoxonium propionate (DMSOP) is a recently identified and abundant marine organosulfur compound with purported roles in oxidative stress protection, global carbon and sulfur cycling1. Diverse algae and bacteria synthesise DMSOP from dimethylsulfoniopropionate (DMSP), which potentially limits the production of climate-active gases e.g., dimethylsulfide (DMS) generated from microbial DMSP cleavage1. Here, DMSOP was found at mM levels in saltmarsh sediment, >10-fold higher than DMSP, and orders of magnitude higher than DMSOP levels previously reported in seawater1. Moreover, we showed bacteria could utilise DMSOP as an osmoprotectant. Some bacteria also cleave DMSOP liberating dimethyl sulfoxide (DMSO), an ubiquitous marine metabolite and acrylate1, but the enzymes responsible and their environmental importance were unknown. Here, we elucidated the DMSOP cleavage mechanism/s in diverse heterotrophic bacteria, e.g., SAR11 clade and Roseobacters, and fungi and phototrophic algae, e.g., Emiliania huxleyi, not previously known to have this activity. All these diverse organisms utilised their DMSP lyase ‘Ddd’ or ‘Alma1’ enzymes, that span five protein families, to cleave DMSOP with similar specific activities to DMSP. Bacteria with DMSP lyases that used DMSP as a carbon source likewise used DMSOP. Furthermore, ddd gene transcription in these bacteria was induced by DMSOP, including dddK in SAR11 strain HTCC1062. We determined the structure of DddK bound to DMSOP and concluded that the catalytic mechanisms of DMSOP cleavage by Ddd enzymes were like those for DMSP. Given the predicted teragram DMSOP production budget1, its newly found abundance in marine sediments, and the abundance of microbial DMSP lyase genes and transcripts in marine environments, DMSOP cleavage is likely a globally significant process influencing global carbon and sulfur fluxes and marine ecological interactions.

Details

Database :
OpenAIRE
Accession number :
edsair.doi...........f056c04d8a99b05b0dc63a6196e142c1
Full Text :
https://doi.org/10.21203/rs.3.rs-2412526/v1