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The complete chloroplast genome sequence of Spiraea blumei G. Don (Rosaceae)
- Source :
- Mitochondrial DNA Part B. 4:3671-3672
- Publication Year :
- 2019
- Publisher :
- Informa UK Limited, 2019.
-
Abstract
- Spiraea blumei G. Don is an ornamental shrub widely distributed in Eastern Asia. Here, we reported and characterized the complete chloroplast (cp) genome sequence of S. blumei (GenBank accession number: MN418904) to provide genomic resources for promoting its conservation. The total chloroplast genome is 155,957 bp in length and contains the typical chloroplast structure, including two inverted repeat (IR) regions of 26,343 bp, a large single-copy (LSC) region of 84,384 bp, and a small single-copy (SSC) region of 18,887 bp. The overall guanine-cytosine (GC) content of the S. blumei chloroplast genome is 36.8%. The cp genome encodes 133 unique genes, including 85 protein-coding genes (PCGs), 40 tRNA genes, and 8 rRNA genes. We used the cp genome of S. blumei and 26 other cp genomes to perform a phylogenetic analysis, which indicated that S. blumei was closely related to S. martini in Rosaceae.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Whole genome sequencing
Genetics
Phylogenetic tree
Inverted repeat
Accession number (library science)
Biology
Ribosomal RNA
010603 evolutionary biology
01 natural sciences
Genome
03 medical and health sciences
030104 developmental biology
GenBank
Molecular Biology
Gene
Subjects
Details
- ISSN :
- 23802359
- Volume :
- 4
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA Part B
- Accession number :
- edsair.doi...........ff7fc42614933b4832922b8188395165
- Full Text :
- https://doi.org/10.1080/23802359.2019.1678434